Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9o02
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 35 0.055
08_01_0388 + 3432177-3433154 31 0.67
03_02_0195 - 6325907-6326173,6326996-6327149,6327245-6327336,632... 31 0.67
10_06_0100 + 10729164-10729562 30 2.1
09_04_0726 + 19758916-19759098,19759774-19760318,19760581-197614... 30 2.1
07_01_0795 - 6257985-6258149,6258276-6258380,6259196-6259328,626... 30 2.1
11_04_0397 - 17230152-17231453 29 2.7
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060... 29 2.7
07_03_1290 + 25537973-25538962 29 2.7
03_02_0816 + 11487811-11488708,11488835-11489235 29 2.7
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 29 2.7
05_03_0179 - 9257066-9258946 29 4.8
01_03_0088 + 12327339-12328092,12329474-12329601,12330249-123304... 29 4.8
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 28 6.3
07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317 28 6.3
06_03_0411 - 20520823-20521674 28 6.3
01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357 28 6.3
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 28 6.3
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.3
07_03_1434 + 26529043-26529927,26530385-26530742,26530820-265310... 28 8.3
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 28 8.3
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 214 PSGVMPPGNRKEKKKDNMDE-ETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDL 390
P G PP +R+ ++KD+ D+ E + + + D VDE+ + Q ++ D
Sbjct: 102 PKGKPPPRSRRRRQKDDDDDYEEEEEEDADFDPDVDEDDEEEVDEDEEEFEQDDDDSDDF 161
Query: 391 VPLQTEATETTN 426
P++ T T N
Sbjct: 162 APIRVRKTSTKN 173
>08_01_0388 + 3432177-3433154
Length = 325
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Frame = +1
Query: 550 PPPRDAGPAIVGATTTSPLGRQAVRSPPRWRRFELVILRNT----PLGSEPAW 696
PPPR A A A T G +AV W E+ ILR P G W
Sbjct: 144 PPPRHAAAAAAAAATAVSDGGEAVEDAGEWTDQEMDILRRQMVKHPAGEPQRW 196
>03_02_0195 -
6325907-6326173,6326996-6327149,6327245-6327336,
6327433-6327534,6328406-6328528,6328635-6328683,
6328759-6328854,6328937-6329276,6329428-6329643,
6329759-6329864,6330144-6330192,6330519-6330792,
6330870-6330960,6331663-6331994,6332084-6332261,
6332815-6332872,6332956-6333089
Length = 886
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 645 PAPSRR-ASDSLPTERAGGRGADDRWPGVPRG 553
PAP RR AS + G A WPG+PRG
Sbjct: 41 PAPERREASAAAAAAEDSGGAAQQGWPGLPRG 72
>10_06_0100 + 10729164-10729562
Length = 132
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 550 PPPRDAGPAIVGATTTSPLGRQAVRSPPRW-RRFELVILRNTPLGSEPAWVED 705
P P AI GATTT + PRW ELV + P ++ A +D
Sbjct: 42 PSPTATATAIAGATTTGAAASSSGGEQPRWFSHPELVRPSSRPAAAQRATADD 94
>09_04_0726 +
19758916-19759098,19759774-19760318,19760581-19761492,
19762067-19762328
Length = 633
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = +1
Query: 214 PSGVMPPGNRKEKKKDNMDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLV 393
P +P N+K KKK + V T +++ + + E + Q N+
Sbjct: 84 PGNAVPETNKKSKKKKKKSKADKQVSTKSRDEKSLDSILEDLSIEKKPMQQRVNQNERAS 143
Query: 394 PLQTEATETTNKDEEIAGLEP 456
+ E ETT I ++P
Sbjct: 144 GKEIEIDETTPGTSSILSIDP 164
>07_01_0795 -
6257985-6258149,6258276-6258380,6259196-6259328,
6260225-6260289,6260569-6261642,6262328-6262433,
6262872-6263044,6263352-6263765
Length = 744
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 550 PPPRDAGPAIVGATTTSPLGRQAVRSPPRWRRFELVILRNTPLGSEPAWVE 702
PPPR A SP + VR+PPR R L P + P W E
Sbjct: 6 PPPRSPAATPDAAAPASPARTRVVRAPPRPPRPRLA----HPGAAPPGWAE 52
>11_04_0397 - 17230152-17231453
Length = 433
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 526 CGAHLSHHPPPRDAGPAIVGATTTSPLGRQAVRSPPRW 639
C H +H P PR G A GAT L AV W
Sbjct: 51 CSLHWAHRPLPRGVGTAAFGATAVLCLAVGAVSLLLSW 88
>07_03_1795 +
29603694-29605208,29605423-29605649,29605739-29606071,
29606229-29606475,29606948-29607076,29607161-29607376,
29607454-29607577,29608377-29608612
Length = 1008
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 566 PGQRSSAPRPPALSVGRLSEARLDGAGLNWL 658
P RSSAP P A+ + RL+++ LDG +L
Sbjct: 31 PAWRSSAPVPRAVPLSRLTDSFLDGTSSVYL 61
>07_03_1290 + 25537973-25538962
Length = 329
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 636 SRRASDSL-PTERAGGRGADDRWPGVP 559
SRRA+ SL P GG GADD +P P
Sbjct: 157 SRRATRSLSPFRGGGGGGADDEYPSSP 183
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 627 ASDSLPTERAGGRGADDRW 571
ASD+ PT A G+G+D+RW
Sbjct: 202 ASDAPPTPEATGKGSDNRW 220
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 575 RSSAPRPPALSVG-RLSEARLDGAGLNWLSYEIPRWGQNQ 691
R+ P PPAL + E L GL +Y P W QNQ
Sbjct: 505 RAGTPLPPALPDSLKYDEVLLRATGLPSTAYNGPSWQQNQ 544
>05_03_0179 - 9257066-9258946
Length = 626
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 ESEAFSAEHISPITLPLGTPGQRSSAPRPP-ALSVGRLSEARLD 637
ES + EH+ P T+ P S+A PP +L+ + EA +D
Sbjct: 173 ESTPTTLEHVFPATMSQSMPSAASAAAAPPVSLTATKEDEADMD 216
>01_03_0088 +
12327339-12328092,12329474-12329601,12330249-12330474,
12332638-12332765,12332880-12333033,12333408-12333841
Length = 607
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 543 PSPSPSGRR--ASDRRRHDHQPSRSAG-CPKPA*MAP 644
P P PS RR ++ RRRHD P+ + G PA AP
Sbjct: 40 PPPLPSARRLPSNRRRRHDQPPNPTTGNGGNPAFRAP 76
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +1
Query: 214 PSGVMPPGNRKEKKKDNMDEETTTVITMESEDEPDT----GVTYFVDEEGRYYYQPTGNN 381
P+ V+ + + K+ +TT I E ED D V FVD +P NN
Sbjct: 27 PTSVLEDDEKISECKNGDVLDTTEAIKQE-EDHLDVLIEEKVDGFVDASSSLNVEPAANN 85
Query: 382 QDLVPLQTEATE 417
DL PL E
Sbjct: 86 SDLSPLTVPVKE 97
>07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317
Length = 496
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 648 KPAPSRRASDSLPTERAGGRGA 583
+P P R + SLP E+ GGRG+
Sbjct: 41 RPPPPPRVAKSLPREQPGGRGS 62
>06_03_0411 - 20520823-20521674
Length = 283
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 419 PQIKTRKSPDSNRLKPPVAHETELM*RQGEESEAFSAEHISPITLPLGTPGQRSSAPRPP 598
P ++ R+S + + + P A E EA S+ I + P GT SSAPR P
Sbjct: 183 PGLRRRRSDEDDAREAPAAAAASA------EEEAASSRRIG--SAPAGTSSSFSSAPRRP 234
Query: 599 ALS 607
LS
Sbjct: 235 YLS 237
>01_06_1161 + 35002125-35002414,35002511-35002648,35003658-35004357
Length = 375
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/90 (22%), Positives = 40/90 (44%)
Frame = +2
Query: 380 IRTWFRCRLKQRKPQIKTRKSPDSNRLKPPVAHETELM*RQGEESEAFSAEHISPITLPL 559
+R +F+C + + ++ + +PP+ T L ++ +A + + P
Sbjct: 142 LRLYFKCTFSRERSCAAKKQVQQRDAGEPPMFLVTYLNEHTCQQPQAVPGTPNTAGSSPT 201
Query: 560 GTPGQRSSAPRPPALSVGRLSEARLDGAGL 649
T QR S+ PPA + + ++GAGL
Sbjct: 202 TTSRQRQSSSSPPA----EMLDLTMNGAGL 227
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 464 PPVAHETELM*RQGEESEAFSAEHISPITLPLGTPGQRSSAPRPPALS-VGRLSEARLDG 640
PP +EL+ R+ +A + P T P P R+ AP+ V R S R +G
Sbjct: 220 PPAIGSSELVVRRVSSLPQSTALPVLPTTTPAAEPSPRAEAPQEEQWGFVSRTSSCR-EG 278
Query: 641 AG 646
+G
Sbjct: 279 SG 280
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 546 SPSPSGRRASDRRRHDHQPSRSAGCPK 626
SP GR DR RHD PSR P+
Sbjct: 260 SPGILGRFPHDRLRHDRSPSRLEPSPR 286
>07_03_1434 +
26529043-26529927,26530385-26530742,26530820-26531007,
26531082-26531271,26531343-26531447,26531521-26531597,
26531628-26531972
Length = 715
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +1
Query: 235 GNRKEKK---KDNMDEETTTVITMESEDEPDTGVTYFVDEEGRYYYQPTGNNQDLVPLQT 405
G+ KE + +D+ + ES D+P T + E G PTGN D P Q
Sbjct: 315 GSSKETESTAEDHPSDNQPATNNAESGDQPPTRIQSAEAEAGVNQEPPTGNQSDAGPSQD 374
Query: 406 EATETTNKD 432
T D
Sbjct: 375 IPEVETQAD 383
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 535 HLSHHPPPRDAGPAIVGATTTSPL 606
H HHPPP ++ A+TT+PL
Sbjct: 235 HHHHHPPPPPPELQLLPASTTAPL 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,007,624
Number of Sequences: 37544
Number of extensions: 490387
Number of successful extensions: 1939
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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