Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9n12
         (278 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   5.0  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    21   8.7  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 RHIVCSININCF 216
           +H +CS N +CF
Sbjct: 766 KHFLCSYNTHCF 777


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
          protein OBPjj5c protein.
          Length = 155

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 60 CMLPKTGILFN 92
          C L +TGILFN
Sbjct: 37 CALNETGILFN 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,791
Number of Sequences: 2352
Number of extensions: 4313
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)