Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9n01
(769 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 468 e-131
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 94 3e-18
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 87 3e-16
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 85 2e-15
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 84 4e-15
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 79 1e-13
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 75 2e-12
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 74 5e-12
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 71 2e-11
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 65 2e-09
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 65 2e-09
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 61 3e-08
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 55 2e-06
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 54 4e-06
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 54 5e-06
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 53 9e-06
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 52 2e-05
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 52 2e-05
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 52 2e-05
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 50 8e-05
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 46 0.001
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 43 0.007
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 42 0.017
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 42 0.022
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 42 0.022
UniRef50_A6PES4 Cluster: Putative membrane protein precursor; n=... 36 1.5
UniRef50_O04325 Cluster: DNA binding protein (CDC27SH) isolog; n... 35 2.6
UniRef50_A3UER7 Cluster: Sensor protein; n=1; Oceanicaulis alexa... 34 3.4
UniRef50_Q4CKG3 Cluster: Microtubule-associated protein Gb4, put... 34 3.4
UniRef50_Q8PHM2 Cluster: Cointegrate resolution protein T; n=8; ... 34 4.5
UniRef50_Q47LN8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A6EF92 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A7GY34 Cluster: Aconitate hydratase 2; n=4; cellular or... 33 5.9
UniRef50_Q61QG1 Cluster: Putative uncharacterized protein CBG070... 33 5.9
UniRef50_O30320 Cluster: ATP-dependent RNA helicase HepA, putati... 33 5.9
UniRef50_P74898 Cluster: Vacuolar type ATP synthase subunit; n=3... 33 7.8
UniRef50_O22943 Cluster: Expressed protein; n=14; Magnoliophyta|... 33 7.8
UniRef50_A2FSV7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bombyx
mori (Silk moth)
Length = 610
Score = 468 bits (1153), Expect = e-131
Identities = 236/256 (92%), Positives = 237/256 (92%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLR 181
KLTPLPLQTVRPFIFKTIVLSEENIGS+DVNENEKVQEFLKNRVNEAIDEASKLKTADLR
Sbjct: 294 KLTPLPLQTVRPFIFKTIVLSEENIGSDDVNENEKVQEFLKNRVNEAIDEASKLKTADLR 353
Query: 182 QPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXG 361
QPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIM G
Sbjct: 354 QPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMKKEKKIREKRECDPEEEG 413
Query: 362 DMTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
DMTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH
Sbjct: 414 DMTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 473
Query: 542 KRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVV 721
KRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVV
Sbjct: 474 KRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVV 533
Query: 722 KLPNTVGXRTXVVLSS 769
KLPNTVG RT VVLSS
Sbjct: 534 KLPNTVGKRTIVVLSS 549
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 94.3 bits (224), Expect = 3e-18
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD 175
KL PLPL+TVRPF+++++VL++ + +G + + + KV +F + RV I+ A T
Sbjct: 308 KLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQHTGH 367
Query: 176 LRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXX 355
+QP LPLIRL + Y ES FN IRFG+ + VAN D++
Sbjct: 368 PKQPTLPLIRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAVNLDK 427
Query: 356 XGDMTGVAAE-AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAF 532
+ A+ A VE L+ Y+E +K L + + + + + + D
Sbjct: 428 EALRRALEADNATRVEELVDRYFEEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIV 487
Query: 533 DAHKRRCIAALLESTAETEKEIAEQLE 613
+K + + L+E+ E I E+LE
Sbjct: 488 KFYKEKAVDHLMEAMPNDE-NIDEELE 513
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 720
Score = 87.4 bits (207), Expect = 3e-16
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 10/235 (4%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADL- 178
K+T +PLQTVRPF + I+LS+ ++ D + E++ FL ++V + I A ++
Sbjct: 336 KMTKVPLQTVRPFYMEDIILSDTDL---DPADEERIYAFLTDKVEQLISRAEDEHAGNIH 392
Query: 179 -RQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXX 355
R+P PLIRL + Y Q+F+ +RFGQ F VANP D+L+
Sbjct: 393 PRKPSKPLIRLRVDYSGGFQSFSTLRFGQQFVDRVANPKDILLFHRKKVQQAKGIRPDID 452
Query: 356 XGDMTGVAAEAAD---VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRR 526
+ + EA D +E L++ Y ++ L +LS + A+R+F K +D ++
Sbjct: 453 E-KLLHLRPEALDNTRMEDLVKDYLRSKDNALDLQILSENRMAQALREFVDKDEKDAIQT 511
Query: 527 AFDAH---KRRCIAALLESTAETEKEIAEQLEVCKR--ELDEADDEKLHTLVDAS 676
++ + TAE +E A++ +R E D+ ++E++ ++ S
Sbjct: 512 LVSWQLEVTQKHLKQRNNVTAENIEEAAQKYTELRRQKEGDQEEEEQIKKVLAES 566
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 85.0 bits (201), Expect = 2e-15
Identities = 65/212 (30%), Positives = 97/212 (45%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQ 184
L P+ LQTVRPFIF + + + + +E+ + ++ ++ I+EA+ L R
Sbjct: 289 LHPIELQTVRPFIFSCLSIEPPENFAGKIAHSERTKILVREKIESMIEEANNLN----RD 344
Query: 185 PLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGD 364
+LPLIRL I YE E Q FN IRFGQ F VANP D++ D
Sbjct: 345 NMLPLIRLIIKYEDERQVFNPIRFGQEFINKVANPEDIVKFATHYKQARRTNNVHVNFID 404
Query: 365 MTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHK 544
V L+ Y+E D LS LSV + +AV F ++ D + + +
Sbjct: 405 PND--EHVTSVIDLISKYFEG---DNHLSALSVTGLNEAVNKFLESNDNDAPQVLLNEQE 459
Query: 545 RRCIAALLESTAETEKEIAEQLEVCKRELDEA 640
+ L+E E E EI E C +++ E+
Sbjct: 460 EYLMKKLMELKPE-EAEI----EDCLKQISES 486
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 83.8 bits (198), Expect = 4e-15
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 12/113 (10%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKL-KTA 172
+LTP+PL+TVRPF+ +VL + E G DVN+ ++ ++LK +VN+ ID+A L +
Sbjct: 316 QLTPIPLRTVRPFVISEVVLEDAAEEEGL-DVNDQMEITKYLKQKVNDLIDQAQALWEER 374
Query: 173 DLRQ---------PLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLI 304
+ R P+LPL+RL + +Q N IRFGQ F G VANP DLL+
Sbjct: 375 NARSIEAGDEEIPPMLPLVRLKVDTTNVTQTSNPIRFGQEFQGRVANPRDLLV 427
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 79.0 bits (186), Expect = 1e-13
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 74.9 bits (176), Expect = 2e-12
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIG-SEDVNENEKVQEFLKNRV-NEAIDEASKLKTAD 175
K+ L L+TVRPF+F+ +VL++ N S + + V+EF+ N + N I +A++ TA
Sbjct: 318 KMNYLKLKTVRPFVFEDLVLNDYNDEISSYKSRQDAVEEFVDNYIENTLITKATEQLTAH 377
Query: 176 LRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIM--XXXXXXXXXXXXXX 349
+QP PLIRL +FY + F+ ++ Q + + ANPND+++
Sbjct: 378 PKQPQAPLIRLRVFYSEDRDVFDTLQLSQKYYHVTANPNDMILFRKCSSKLKKKDIKVQE 437
Query: 350 XXXGDMTGVAAEAAD-------VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHN 508
G+++ + + V+ + Y+ K +L+VLS+ + +++ F ++
Sbjct: 438 QDLGEVSEIFRFDENEKDWKRTVQGGMTEYFNKPDKVNKLTVLSLTGLNESLARFVNAND 497
Query: 509 EDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCK-RELDEADDEKLHTLVDASARP 685
+ + + ++ L++ +T+ +I ++ + L + + K AR
Sbjct: 498 SNAFKDLVKYQMEKSVSRLVKQELKTKDDILSAIKDYRDSRLHQQQEAKSEEESFFDARK 557
Query: 686 SAPA 697
+ PA
Sbjct: 558 NLPA 561
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 73.7 bits (173), Expect = 5e-12
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLR 181
+ P PL TVRPFI I+L+ NI +N+ +Q +++ +V I++A
Sbjct: 324 RFKPFPLNTVRPFIMDQIILANSNI--HPTQQNDVIQ-WIEQKVESMIEQAKLKSQGKPN 380
Query: 182 QPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXG 361
+ +LPLIRL + Y S N +FGQ F G VANPND+L+
Sbjct: 381 ESMLPLIRLKVDYTGYS-TINPQKFGQRFQGRVANPNDVLLFHRKKPTTLSSKKQKDGGE 439
Query: 362 -DMTGVAAEAAD---VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRA 529
D+ + + D V + + P D RL +LS + +++ F K D + +
Sbjct: 440 LDVNSIKEKEEDKVKVADFISEFLGNTPND-RLQILSENDLFNSLHSFVEKDETDSILKM 498
Query: 530 FD 535
D
Sbjct: 499 VD 500
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 71.3 bits (167), Expect = 2e-11
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 8/224 (3%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEAS--------K 160
L + L+TVRPFI K I+LSE + V ++V +L ++V EAI EA+
Sbjct: 301 LEKIRLRTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGT 360
Query: 161 LKTADLRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXX 340
+ + +P LPLIRL + Y Q N RF F G VAN D++
Sbjct: 361 VPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKR 420
Query: 341 XXXXXXGDMTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVL 520
+ + + VESL+ Y K RL L + +AV +F K + D +
Sbjct: 421 NDGLYTSAVEDIKINSLRVESLVNEYL----KTNRLECLPEDSLGEAVVNFVEKDDRDAI 476
Query: 521 RRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEK 652
+ + + I L++ TE+ + +++ +L + K
Sbjct: 477 KECVETQLNKQINLLVKKRV-TEENLEQEISSIINDLPKISTTK 519
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 65.7 bits (153), Expect = 1e-09
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASK--LKTADL 178
+ P+PLQTVRPF+ +VLSEE + +E V + L+ RV+ I A + +
Sbjct: 419 IEPIPLQTVRPFVMDDMVLSEELYDAGLSSERGDVIKLLRKRVDGLIARAKREFQERYPR 478
Query: 179 RQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLL 301
R+ LPL+RL + Y + + N RFGQ F G VANP ++L
Sbjct: 479 REMPLPLVRLRVEYTNQEIS-NPQRFGQEFAGKVANPKEVL 518
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLS-EENIGSEDVNENEKVQEFLKNRVNEAIDEASK----LK 166
+L +PL+TVRPF +VLS G+ D+N+ + + FL+ +V I +A K
Sbjct: 332 QLEEIPLKTVRPFELDEVVLSYAAEQGAVDLNDRDSITSFLREQVEALILQAKKNWKEKN 391
Query: 167 TADLRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLL 301
+ +LPLIRL + + N +RFGQ + VANP D+L
Sbjct: 392 NGSTKNMMLPLIRLKVETTDAKEMVNPVRFGQEYVNRVANPRDIL 436
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 64.9 bits (151), Expect = 2e-09
Identities = 39/99 (39%), Positives = 55/99 (55%)
Frame = +2
Query: 8 TPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
T +PL +VRPF + IVL +E+ D N+ + E L V I++ASK K + +
Sbjct: 302 TKIPLTSVRPFEYTEIVLKDES--DIDPNDQNSILEHLDKVVRNLIEKASK-KAVNRSEI 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLI 304
LPL+R+ + Y N RFGQ + G VANP D+LI
Sbjct: 359 KLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDILI 396
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/101 (35%), Positives = 60/101 (59%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQ 184
+ P+ L+TVRPFI + +VL +E ++++ V +FL N+V E I +A+++ T+
Sbjct: 296 IEPVKLKTVRPFIMEEVVLQKEGFVPGPASKDD-VSKFLVNKVQELIQKANEIDTSGQ-- 352
Query: 185 PLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIM 307
LPLIRL + Y + N RF F G +AN ND++++
Sbjct: 353 --LPLIRLRVDYTGDYHVENPRRFSNRFVGKIANVNDVILL 391
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLR 181
+ T +PLQ+VRPF + +VL ++ D + + E L V+ ID++ + ++
Sbjct: 375 RTTKIPLQSVRPFEYAEVVLEDQ--VDVDPGDEASIHEHLHKVVSNLIDKSREEASSSGS 432
Query: 182 QPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIM 307
+P LPL+R+ + + S N +FGQ++ G V NP D+L++
Sbjct: 433 KPKLPLVRIKVHHTGLS-TINSKQFGQHYVGKVVNPQDILLL 473
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 54.8 bits (126), Expect = 2e-06
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKN-----RVNEAIDEASKL- 163
K T +PL++VRPF + + L ++ +G E +N + E L N +N + + S L
Sbjct: 301 KQTNIPLKSVRPFQYAEVQLKDQ-LGVE-LNNEAALYEHLDNIFSAVLLNTELFQVSNLI 358
Query: 164 -KTA-DLRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXX 337
KTA +P LPL+R+ + Y S RFGQ + G VANPND+++
Sbjct: 359 DKTAISGSEPKLPLVRVKVDYSGFS-TITPQRFGQKYVGKVANPNDIILF----SRSAQQ 413
Query: 338 XXXXXXXGDMTGVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHN--- 508
G D +S+ E+ + + +L + A+ DF K
Sbjct: 414 NRTREHTGSSEECEPNELDQQSIEELIAES---NLNMQILDKNDLDSALHDFVNKDENMA 470
Query: 509 -EDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRE 628
L + DA K++ A + A E++I QL+ C +E
Sbjct: 471 FHSCLDKNIDAAKKKLTFATKDLKA--EEDIVLQLDQCMQE 509
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: Mre11
protein - Ostreococcus tauri
Length = 1229
Score = 54.0 bits (124), Expect = 4e-06
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL------ 163
+ TP+PL + RPF F+ + L+ E V+ E + ++L+N V + I A++
Sbjct: 785 RATPIPLLSSRPFEFEQMSLASTP-ELEGVDA-EGMSKYLENCVRDMIARATRKHKERHA 842
Query: 164 -KTADLRQPL-LPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLI 304
D+ + LPLIRL + Y N RFGQ F G+VANP+D+L+
Sbjct: 843 PNEVDMTDRMNLPLIRLRVDYSGGFSTINPQRFGQKFVGVVANPHDILL 891
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNE-NEKVQEFLKNRV-NEAIDEASKLKTAD 175
KL L LQTVRPFIF ++L +E I +E + +F+ N + NE + +A+ +
Sbjct: 301 KLEKLKLQTVRPFIFDNLILKDEEIPKNYAERLSESIFKFIDNYIQNELMPKAALQLSGH 360
Query: 176 LRQPLLPLIRLSIFYER 226
+QP+LPL+RL I ++
Sbjct: 361 PKQPILPLLRLRILTQK 377
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 52.8 bits (121), Expect = 9e-06
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEEN--IGSEDVNENEKVQEFLKNRVNEAIDEAS------KLKT 169
+PL+TVRPF+ + IVL+ + G + N ++ + L VNE I+EA+ +
Sbjct: 315 IPLKTVRPFVTREIVLASDKRFKGLDKQNNRHEITKRLMVIVNEMIEEANAEWRAVHAED 374
Query: 170 ADL---RQPLLPLIRLSIFYERES----QNFNRIRFGQNFNGLVANPNDLLIMXXXXXXX 328
D+ +P LPL+RL + Y + N RF F G VAN ND++
Sbjct: 375 DDMDEDMEPPLPLVRLKVDYTAPDGARYEVENPHRFSNRFTGKVANHNDVVRFHCNTKGK 434
Query: 329 XXXXXXXXXXGDMTGV--AAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLK 502
D+ + +A+ V++L++ ++ Q L +L +DAV F K
Sbjct: 435 KNVATAPGVREDIAEILESADTIKVDNLVQEFFAQQ----SLKILPQAPFSDAVNQFVSK 490
Query: 503 HNE 511
++
Sbjct: 491 DDK 493
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 52.0 bits (119), Expect = 2e-05
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEA----SKLKT 169
++T PL+++RP + +T+ L +N G + + V++FL++ V + I+EA S++
Sbjct: 322 RVTGFPLRSIRPVVRRTVELWRDNPGCRTL---DAVEDFLRSVVEQMIEEAEEQVSRIPD 378
Query: 170 ADLR-QPLL--PLIRLSI-FYERESQNF---NRIRFGQNFNGLVANPNDLLIMXXXXXXX 328
L+ P + P++RL++ F + +S F N RFGQ + +V NP++LL
Sbjct: 379 DVLKFHPNIKFPIMRLAVDFTDPDSTTFPQPNINRFGQQYMDIVVNPSELLRPIKPKQVP 438
Query: 329 XXXXXXXXXXGDMTGVAA---EAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTL 499
G+ V +D+ + + + A +D S+LS ++ AV F
Sbjct: 439 RVASSASATGGEAPVVPVPRLNTSDIRTKVAEVFNANARD-ACSLLSESEVSAAVYAFAE 497
Query: 500 KHNEDVLRRAFDAHKRRCIAALLESTAETEKE 595
K D + +C ++ S E E
Sbjct: 498 KGERDAIDERICELLSKCQKSVWVSMRRGESE 529
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVN-------------ENEKVQEFLKNRV-NE 139
K+ L ++T+RPF++ + L + N+G + E VQ+F+ + + N
Sbjct: 308 KMKYLKVKTIRPFVYSRLNLDQHNVGLSNFQYRPGPFGKIISKKRTEAVQDFVDSYIENV 367
Query: 140 AIDEASKLKTADLRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIM 307
+ + + +T +QP PLIRL + +E F+ +R + VAN D++++
Sbjct: 368 LLPQTREQETGHPKQPTKPLIRLKVLCSQEQDRFSAVRLVNKYQEEVANAKDMILL 423
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 51.6 bits (118), Expect = 2e-05
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSED--------VNENEKVQEFLKNRVN----EAI 145
K TP+PL + R FI IVL ++ E + E K+ + KN++N I
Sbjct: 227 KTTPIPLLSPRVFIHDNIVLDKDLAQVEQHLIEKVHQLIEQAKIVQLEKNKLNLPQNPEI 286
Query: 146 DEASKLKTADLRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLI 304
E K K+ DL P+IRL + YE +SQ N RFG F ANP+++L+
Sbjct: 287 QEILKNKSMDL-----PIIRLRVEYECDSQLINSKRFGFQFVSKTANPHEILM 334
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 49.6 bits (113), Expect = 8e-05
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Frame = +2
Query: 11 PLPLQTVRPFIFKTIVLSEENIGSEDVNENEK--------VQEF-LKNRVNEAIDEASKL 163
P+PLQTVRP + ++L + GS + + ++ + E ++ ++NE I A
Sbjct: 359 PIPLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAK 418
Query: 164 KTADLRQPLLPLIRLSIFYERESQNF---NRIRFGQNFNGLVANPNDLLIMXXXXXXXXX 334
+ RQP LPLIRL + Y+ + N N R G + +VAN D++ +
Sbjct: 419 RRP--RQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEG 476
Query: 335 XXXXXXXXGDMTGVAAE-----AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFT 496
++T +A E A ++++++ Y+ QP +++VL I A+ ++
Sbjct: 477 KLQTENEK-NITEMADEMGQVSATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYS 534
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 48.0 bits (109), Expect = 3e-04
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAID----------EA 154
L LPL+TVRPF+ + IVL + ++ ++ + V FL + V +AI+ EA
Sbjct: 298 LEALPLETVRPFVLREIVLLKTDLVPGAASKGD-VIAFLTSEVEKAIEIANVGYMHSQEA 356
Query: 155 SKLKTADLRQ--------PLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLI 304
K+ + L P LPLIRL + Y + N RF F G +AN ND+++
Sbjct: 357 KKMSSHTLAASSESVSSLPPLPLIRLRVEYSGGFEIENVRRFSNQFVGRIANANDVVL 414
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11 -
Aspergillus clavatus
Length = 816
Score = 45.6 bits (103), Expect = 0.001
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDV----NENEKVQEFLKNRVNEAIDEASK--L 163
K P+ L++VRPF + IVLSEE G++ + N +V FL + V E I+EA L
Sbjct: 308 KCEPIRLKSVRPFAIREIVLSEEK-GAQKLARKENNRTEVTRFLISIVEELIEEAKAEWL 366
Query: 164 KTAD--------LRQPLLPLIRLSIFYERESQNF----NRIRFGQNFNGLVANPNDLL-I 304
+ D R+ LPL+RL + N RF F G VAN ND++
Sbjct: 367 EMQDDAEDEEDEEREVPLPLVRLRVETSTPDGGSYDCENPQRFSNRFVGKVANVNDVVQF 426
Query: 305 MXXXXXXXXXXXXXXXXXGDMTGVAA-EAADVESLLRAYYEAQPKDKRLSVLSVRVITDA 481
M+ ++ + VE L+R + AQ L++L DA
Sbjct: 427 YRKKKNATTRKKDDGVDEAAMSHLSTLDTVKVEQLVREFLAAQ----SLTILPQNSFGDA 482
Query: 482 VRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHT 661
V F K ++ + + + L+ E ++ + E+ + + +A D+
Sbjct: 483 VAQFIDKDDKHAMEMFVNESLESQVKHLMNLDREADE--MDDEEIAQSSIQKAMDKYRTQ 540
Query: 662 LVDASAR 682
+ D +R
Sbjct: 541 MEDMFSR 547
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 43.2 bits (97), Expect = 0.007
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEK-VQEFLKNRVNEAIDEASKLKTADL 178
+LTP L++VRP + +T+ L + ++ E + + + ++EA + S++ L
Sbjct: 289 RLTPYTLRSVRPVVRRTVELRHDLPDGRTLDAVETFLHSVMSDMISEAEEHVSRIPDDVL 348
Query: 179 R-QPLL--PLIRLSIFYERESQ------NFNRIRFGQNFNGLVANPNDLL 301
P L PLIRL++ + + NFNR FGQ + +VANP +LL
Sbjct: 349 TFHPNLKYPLIRLAVDFTDVTSAPYPQPNFNR--FGQQYMDVVANPGELL 396
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 41.9 bits (94), Expect = 0.017
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 16/229 (6%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASK------- 160
+L + L+TVRPF+ K + LS I E + ++L ++ I++A+
Sbjct: 289 ELEKIRLKTVRPFVMKEVALSNSGIAPGREAWIE-ISKYLSMEIDGMIEKANSEWLAEHG 347
Query: 161 LKTADLRQ-----PLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXX 325
L D+ P LPLIRL + Y + N RF + G VAN ND ++
Sbjct: 348 LAEEDVGAGAGVTPPLPLIRLRVEYSGGYEVENPRRFSNRYVGRVANIND--VVQFYKKK 405
Query: 326 XXXXXXXXXXXGDMTGVAAEAADVESL----LRAYYEAQPKDKRLSVLSVRVITDAVRDF 493
D+ + AD + L ++ E + L +L + +AV F
Sbjct: 406 ARDTTGSAATQQDLRKAVSRTADRQVLDNLKVQTLVEEILGKEALCLLPENGLGEAVASF 465
Query: 494 TLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEA 640
K++++ ++ D + +A LL+ E+ + + K + EA
Sbjct: 466 VDKNDKNAVKAFVDGSLKFQVAELLKINDLDEESLLTHMGSAKTKGREA 514
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 41.5 bits (93), Expect = 0.022
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEENIGSEDVNENE-------KVQEFLKNRVNEAIDEASKLKTA 172
+ L+TVRPFI + L +E S ++++ K++E +K + D ++ ++
Sbjct: 299 IKLKTVRPFIMDEVSLLKERFISGPASKDDISKFLTFKIEELVKKAKQQFFDSNREMFSS 358
Query: 173 D-LRQPL----LPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLL 301
+ L Q LPL+RL + Y + + N RF F G +AN ND++
Sbjct: 359 NNLEQHENEIPLPLVRLRVEYSGDYEVENPRRFSNKFVGKIANINDVV 406
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 41.5 bits (93), Expect = 0.022
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAI---DEASKLKTA 172
K+TP+PL+T+R F K+I L +++ ++ + ++L +V E I +E +K K A
Sbjct: 292 KMTPIPLETIRTFKMKSISL--QDVPHLRPHDKDATSKYLIEQVEEMIRDANEETKQKLA 349
Query: 173 D------LRQPLLPLIRLSIFYERES--------QNFNRIRFGQNFNGLVANPNDLL 301
D + + PLIRL + Y S Q N RF F G VAN N+++
Sbjct: 350 DDGEGDMVAELPKPLIRLRVDYSAPSNTQSPIDYQVENPRRFSNRFVGRVANGNNVV 406
>UniRef50_A6PES4 Cluster: Putative membrane protein precursor; n=1;
Shewanella sediminis HAW-EB3|Rep: Putative membrane
protein precursor - Shewanella sediminis HAW-EB3
Length = 945
Score = 35.5 bits (78), Expect = 1.5
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Frame = +2
Query: 392 DVESLLRAY----YEAQPKDKRLSVLSVRVITDAVRDFTLKHNE-DVLRRAFDAHKRRCI 556
D++SLL ++ EA+P+ + ++ + ++ D T+ + D L +FDA
Sbjct: 546 DLDSLLASFDAPAAEAEPEAELTDEIAAELESEESPDDTVSEEDLDSLLASFDAP----- 600
Query: 557 AALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLV---DASARPSAPAAQL 706
A ES AE EIA +LE + D ++E L +L+ DA A + P A+L
Sbjct: 601 AVEAESEAELTDEIAAELESEESPDDNVNEEDLDSLLASFDAPAAEAEPEAEL 653
>UniRef50_O04325 Cluster: DNA binding protein (CDC27SH) isolog; n=4;
Arabidopsis thaliana|Rep: DNA binding protein (CDC27SH)
isolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 717
Score = 34.7 bits (76), Expect = 2.6
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +2
Query: 413 AYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEK 592
A +E++ D+ L ++ V+TDA + +L D HK + + L+ A E
Sbjct: 598 ALHESKRNDEALMMMEKAVLTDAKNPLPKYYKAHILTSLGDYHKAQKVLEELKECAPQES 657
Query: 593 EIAEQLEVCKRELDEADDEKLH--TLVDASARPS 688
+ L +L + D LH +D S PS
Sbjct: 658 SVHASLGKIYNQLKQYDKAVLHFGIALDLSPSPS 691
>UniRef50_A3UER7 Cluster: Sensor protein; n=1; Oceanicaulis
alexandrii HTCC2633|Rep: Sensor protein - Oceanicaulis
alexandrii HTCC2633
Length = 1139
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 509 EDVLRRAFDAHKRRCI--AALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDAS 676
E L+RA+D + R A L++ +E ++A+ LEV +RE + A K L AS
Sbjct: 725 EQALKRAYDLLETRVEERTAALKAESEARLQLAQDLEVARREAEAATQSKTRFLAAAS 782
>UniRef50_Q4CKG3 Cluster: Microtubule-associated protein Gb4,
putative; n=1; Trypanosoma cruzi|Rep:
Microtubule-associated protein Gb4, putative -
Trypanosoma cruzi
Length = 413
Score = 34.3 bits (75), Expect = 3.4
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 80 SEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIFYERESQNFNRIRFG 259
+ ++ E + +L+NR+N D +L+ D Q L+ L RL E + N NR+
Sbjct: 204 TNEMTPTESARTYLRNRLNSLNDTMKRLEKEDGAQMLMALRRL----EATTNNRNRVTKR 259
Query: 260 QNFNGLVA 283
Q F L A
Sbjct: 260 QRFGNLYA 267
>UniRef50_Q8PHM2 Cluster: Cointegrate resolution protein T; n=8;
Xanthomonas|Rep: Cointegrate resolution protein T -
Xanthomonas axonopodis pv. citri
Length = 358
Score = 33.9 bits (74), Expect = 4.5
Identities = 28/97 (28%), Positives = 44/97 (45%)
Frame = +2
Query: 377 AAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCI 556
A +AA E R AQ ++R+S L+VRV +L+H + R A + H R +
Sbjct: 139 AGDAARSEVARRTTELAQ-LEERISGLTVRVAEHDAHAKSLEHKHEHAREALE-HYRTSV 196
Query: 557 AALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLV 667
E ++L+V R+ +EA K H L+
Sbjct: 197 KDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLM 233
>UniRef50_Q47LN8 Cluster: Putative uncharacterized protein; n=1;
Thermobifida fusca YX|Rep: Putative uncharacterized
protein - Thermobifida fusca (strain YX)
Length = 708
Score = 33.9 bits (74), Expect = 4.5
Identities = 30/98 (30%), Positives = 43/98 (43%)
Frame = +2
Query: 371 GVAAEAADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRR 550
G +A A L A EA+ K S + +T V + E++ R DA +
Sbjct: 406 GRSAAATAAAELASALAEARSDAKSDSAELLEQLTARVEELRAAVAEEL--RTLDAAAQE 463
Query: 551 CIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTL 664
AAL E AE + E+L+ +REL E D L T+
Sbjct: 464 RGAALSERFAEHHNAVTERLDQHERELAERVDTHLSTI 501
>UniRef50_A6EF92 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 219
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 11 PLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPL 190
P P++ +R + +VLS+E++ + ENE ++ K ++ D + + RQ L
Sbjct: 128 PFPVKFIRGYERNIVVLSDESVDGMQLKENELLKPVQKAKIQYETDPNYQPFVEEYRQAL 187
Query: 191 LPLIRLS 211
++LS
Sbjct: 188 TKYLKLS 194
>UniRef50_A7GY34 Cluster: Aconitate hydratase 2; n=4; cellular
organisms|Rep: Aconitate hydratase 2 - Campylobacter
curvus 525.92
Length = 1009
Score = 33.5 bits (73), Expect = 5.9
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +2
Query: 59 LSEENIGS--EDVNENEKVQ----EFLKNRVNEAIDEASKLKTADLRQ 184
L++EN+G E+ ENEK Q + L NRV +D+A+K+K L +
Sbjct: 59 LNDENLGKVWEEFEENEKGQIWLVDLLANRVQPGVDDAAKVKAEFLNE 106
>UniRef50_Q61QG1 Cluster: Putative uncharacterized protein CBG07030;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG07030 - Caenorhabditis
briggsae
Length = 549
Score = 33.5 bits (73), Expect = 5.9
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 500 KHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASA 679
+ + +R +A + +AA +KEI EQ +R+L E +DE L + AS
Sbjct: 398 REEREAIRNQQEAEYKASLAADKARMEAKQKEIEEQRLEEERKLKEEEDEALRRQLVASQ 457
Query: 680 RP-----SAPAAQLIVPVVKLP 730
P SAP A++I +LP
Sbjct: 458 LPDEPPASAPVAEIINVKFRLP 479
>UniRef50_O30320 Cluster: ATP-dependent RNA helicase HepA, putative;
n=1; Archaeoglobus fulgidus|Rep: ATP-dependent RNA
helicase HepA, putative - Archaeoglobus fulgidus
Length = 943
Score = 33.5 bits (73), Expect = 5.9
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = +2
Query: 392 DVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLE 571
+VE +R+YY+ ++ + S+ V I ++ VL+ + RR L E
Sbjct: 261 EVEKYVRSYYKLAEEENKRSIGLVATIVGRAVSSSINAGVQVLKNRY----RR----LFE 312
Query: 572 STAETEKEIAEQLEVCKRELDEADDEKLHTL 664
AE ++ + L+ K+ +E DDEKL L
Sbjct: 313 GFAEELEDAEDILDELKQAEEEGDDEKLEKL 343
>UniRef50_P74898 Cluster: Vacuolar type ATP synthase subunit; n=3;
Thermus thermophilus|Rep: Vacuolar type ATP synthase
subunit - Thermus thermophilus
Length = 120
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 563 LLESTAETEKEIAEQLEVCKRELDE----ADDEKLHTLVDASARPSAPAAQ 703
L++S AE EK++ E+LE K+E +E A+ E L +A A+ A AQ
Sbjct: 22 LIKSLAEKEKQLLERLEAAKKEAEERVKRAEAEAKALLEEAEAKAKALEAQ 72
>UniRef50_O22943 Cluster: Expressed protein; n=14;
Magnoliophyta|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 771
Score = 33.1 bits (72), Expect = 7.8
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +3
Query: 369 RVWLQKLLMWSHFYVHIMKLSRRIRDFLYYQSES*LMQFGILPLSTMKMSCGGHLMLINV 548
R L+ L++ + ++ LS + LY + + LP + S + +
Sbjct: 532 RTALEWRLLYGRIFKTVVILSSQKNSDLYVEEAKLDHIYKHLPKIFDRYSSAEGFLFVED 591
Query: 549 VALLHYWNLLQRPKKKLLNN*RFVSESW 632
+L+YWNLLQ K K+ + VS+SW
Sbjct: 592 DTVLNYWNLLQADKSKIWTTDK-VSKSW 618
>UniRef50_A2FSV7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2861
Score = 33.1 bits (72), Expect = 7.8
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 77 GSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIFYERESQN 238
G++ + ENE N+ NE ++ +K ++ + +QP++ LI LS E+E +N
Sbjct: 1803 GTKQIQENETESN---NKQNEIDEQQNKTESEEKKQPVIVLIPLSNKTEKEEEN 1853
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,410,085
Number of Sequences: 1657284
Number of extensions: 9186437
Number of successful extensions: 33742
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 32161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33680
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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