Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9n01
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11 pr... 79 2e-14
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 79 2e-14
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 79 2e-14
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 79 2e-14
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 79 2e-14
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 79 2e-14
BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for IM... 75 2e-13
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 32 2.0
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 32 2.0
L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein. 32 2.6
BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1 ... 32 2.6
AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical rhabdomyos... 32 2.6
AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1 ... 32 2.6
BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein. 30 7.9
BC031621-1|AAH31621.1| 401|Homo sapiens Rab interacting lysosom... 30 7.9
BC004961-1|AAH04961.1| 348|Homo sapiens RILP protein protein. 30 7.9
AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating p... 30 7.9
AL050195-1|CAB43313.1| 246|Homo sapiens hypothetical protein pr... 30 7.9
AK055755-1|BAB71003.1| 401|Homo sapiens protein ( Homo sapiens ... 30 7.9
AJ404317-1|CAC33443.1| 401|Homo sapiens rab interacting lysosom... 30 7.9
AJ278711-1|CAC82174.1| 401|Homo sapiens hypothetical protein pr... 30 7.9
AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating ... 30 7.9
>U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11
protein.
Length = 680
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 11
protein.
Length = 708
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11
protein.
Length = 708
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and
repair protein protein.
Length = 708
Score = 79.0 bits (186), Expect = 2e-14
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAH 541
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ 477
Query: 542 KRRCIAALLESTAET-EKEIAEQL----EVCKRELDEADDEKLHTLVDASA 679
+ L E + E +I E++ E ++ +E DDE + A A
Sbjct: 478 LEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
>BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for
IMAGE:4687479) protein.
Length = 517
Score = 75.4 bits (177), Expect = 2e-13
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQP 187
+PL TVR F + IVL+ + ++ + +Q F ++ E ++ A + + + QP
Sbjct: 299 IPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQP 358
Query: 188 LLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXXXGDM 367
PL+RL + Y + F+ +RF Q F VANP D +I G +
Sbjct: 359 EKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD-IIHFFRHREQKEKTGEEINFGKL 417
Query: 368 TGVAAEAAD--VESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVL 520
+E VE L++ Y++ K+ +LS+L+ R + +AV++F K +D +
Sbjct: 418 ITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAI 470
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 401 SLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTA 580
+LL A D+ +S +S+ I + + +DVL F + K + ++ LL
Sbjct: 509 TLLEAQNRTGEADREVSEISIVDIANKRSSSAEESGQDVLENTF-SQKHKELSVLLLEMK 567
Query: 581 ETEKEIAE-QLEVCKRELDEADDEKL 655
E ++EIA +L++ + +EAD E L
Sbjct: 568 EAQEEIAFLKLQLQGKRAEEADHEVL 593
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372
protein.
Length = 3225
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 401 SLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTA 580
+LL A D+ +S +S+ I + + +DVL F + K + ++ LL
Sbjct: 475 TLLEAQNRTGEADREVSEISIVDIANKRSSSAEESGQDVLENTF-SQKHKELSVLLLEMK 533
Query: 581 ETEKEIAE-QLEVCKRELDEADDEKL 655
E ++EIA +L++ + +EAD E L
Sbjct: 534 EAQEEIAFLKLQLQGKRAEEADHEVL 559
>L42542-1|AAB00103.1| 655|Homo sapiens RLIP76 protein protein.
Length = 655
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 59 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 163
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 462 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 496
>BC013126-1|AAH13126.1| 655|Homo sapiens ralA binding protein 1
protein.
Length = 655
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 59 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 163
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 462 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 496
>AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.2A protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 59 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 163
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 261 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 295
>AB209924-1|BAD93161.1| 462|Homo sapiens ralA binding protein 1
variant protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 59 LSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKL 163
LS+E++ E++NENE+V L + NE + E +L
Sbjct: 269 LSKEDVSKEEMNENEEVINILLAQENEILTEQEEL 303
>BC054492-1|AAH54492.1| 997|Homo sapiens RABGAP1 protein protein.
Length = 997
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 512 DVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDE 649
D L + K++ I A E E+E A+ E+C+RELD+A+ E
Sbjct: 810 DALNKELLMTKQKLIDAE-EEKRRLEEESAQLKEMCRRELDKAESE 854
>BC031621-1|AAH31621.1| 401|Homo sapiens Rab interacting lysosomal
protein protein.
Length = 401
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 407 LRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAET 586
LR A P+++R + ++ +TD RD HN D+ +R + + L+
Sbjct: 98 LRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQR---GQETEALQEQLQRLLLV 154
Query: 587 EKEIAEQLEVCKRELDEADDEK 652
E+ +L + +L A D +
Sbjct: 155 NAELRHKLAAMQTQLRAAQDRE 176
>BC004961-1|AAH04961.1| 348|Homo sapiens RILP protein protein.
Length = 348
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 407 LRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAET 586
LR A P+++R + ++ +TD RD HN D+ +R + + L+
Sbjct: 45 LRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQR---GQETEALQEQLQRLLLV 101
Query: 587 EKEIAEQLEVCKRELDEADDEK 652
E+ +L + +L A D +
Sbjct: 102 NAELRHKLAAMQTQLRAAQDRE 123
>AL365338-3|CAH70298.1| 997|Homo sapiens RAB GTPase activating
protein 1 protein.
Length = 997
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 512 DVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDE 649
D L + K++ I A E E+E A+ E+C+RELD+A+ E
Sbjct: 810 DALNKELLMTKQKLIDAE-EEKRRLEEESAQLKEMCRRELDKAESE 854
>AL050195-1|CAB43313.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 512 DVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDE 649
D L + K++ I A E E+E A+ E+C+RELD+A+ E
Sbjct: 59 DALNKELLMTKQKLIDAE-EEKRRLEEESAQLKEMCRRELDKAESE 103
>AK055755-1|BAB71003.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ31193 fis, clone KIDNE2000497, weakly similar to
TRICHOHYALIN. ).
Length = 401
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 407 LRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAET 586
LR A P+++R + ++ +TD RD HN D+ +R + + L+
Sbjct: 98 LRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQR---GQETEALQEQLQRLLLV 154
Query: 587 EKEIAEQLEVCKRELDEADDEK 652
E+ +L + +L A D +
Sbjct: 155 NAELRHKLAAMQTQLRAAQDRE 176
>AJ404317-1|CAC33443.1| 401|Homo sapiens rab interacting lysosomal
protein protein.
Length = 401
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 407 LRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAET 586
LR A P+++R + ++ +TD RD HN D+ +R + + L+
Sbjct: 98 LRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQR---GQETEALQEQLQRLLLV 154
Query: 587 EKEIAEQLEVCKRELDEADDEK 652
E+ +L + +L A D +
Sbjct: 155 NAELRHKLAAMQTQLRAAQDRE 176
>AJ278711-1|CAC82174.1| 401|Homo sapiens hypothetical protein
protein.
Length = 401
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 407 LRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAET 586
LR A P+++R + ++ +TD RD HN D+ +R + + L+
Sbjct: 98 LRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQR---GQETEALQEQLQRLLLV 154
Query: 587 EKEIAEQLEVCKRELDEADDEK 652
E+ +L + +L A D +
Sbjct: 155 NAELRHKLAAMQTQLRAAQDRE 176
>AJ011679-1|CAB40267.2| 997|Homo sapiens Rab6 GTPase activating
protein, GAPCenA protein.
Length = 997
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 512 DVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDE 649
D L + K++ I A E E+E A+ E+C+RELD+A+ E
Sbjct: 810 DALNKELLMTKQKLIDAE-EEKRRLEEESAQLKEMCRRELDKAESE 854
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,253,060
Number of Sequences: 237096
Number of extensions: 1408427
Number of successful extensions: 4033
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4026
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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