Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9n01
(769 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132144-1|AAD33591.1| 620|Drosophila melanogaster endo/exonucl... 94 2e-19
AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-P... 94 2e-19
AE014297-1413|AAF54724.2| 573|Drosophila melanogaster CG12213-P... 33 0.57
AE014297-1412|AAN13537.1| 506|Drosophila melanogaster CG12213-P... 33 0.57
X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin... 31 1.3
BT011336-1|AAR96128.1| 914|Drosophila melanogaster SD02170p pro... 31 1.3
BT001607-1|AAN71362.1| 604|Drosophila melanogaster RE31467p pro... 31 1.3
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 31 1.3
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 31 1.3
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 31 1.3
AE013599-3654|AAM68265.1| 904|Drosophila melanogaster CG5411-PB... 31 1.3
AE013599-3653|AAM68264.1| 805|Drosophila melanogaster CG5411-PD... 31 1.3
AE013599-3651|AAM68263.1| 914|Drosophila melanogaster CG5411-PA... 31 1.3
BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p pro... 30 4.0
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA... 30 4.0
AY069064-1|AAL39209.1| 759|Drosophila melanogaster GH07892p pro... 29 7.0
AE014298-2573|AAF48731.1| 759|Drosophila melanogaster CG8568-PA... 29 7.0
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 29 9.3
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro... 29 9.3
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 29 9.3
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein. 29 9.3
AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-P... 29 9.3
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P... 29 9.3
AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB, ... 29 9.3
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 29 9.3
>AF132144-1|AAD33591.1| 620|Drosophila melanogaster
endo/exonuclease Mre11 protein.
Length = 620
Score = 94.3 bits (224), Expect = 2e-19
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD 175
KL PLPL+TVRPF+++++VL++ + +G + + + KV +F + RV I+ A T
Sbjct: 308 KLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQHTGH 367
Query: 176 LRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXX 355
+QP LPLIRL + Y ES FN IRFG+ + VAN D++
Sbjct: 368 PKQPTLPLIRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAVNLDK 427
Query: 356 XGDMTGVAAE-AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAF 532
+ A+ A VE L+ Y+E +K L + + + + + + D
Sbjct: 428 EALRRALEADNATRVEELVDRYFEEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIV 487
Query: 533 DAHKRRCIAALLESTAETEKEIAEQLE 613
+K + + L+E+ E I E+LE
Sbjct: 488 KFYKEKAVDHLMEAMPNDE-NIDEELE 513
>AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-PA
protein.
Length = 620
Score = 94.3 bits (224), Expect = 2e-19
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD 175
KL PLPL+TVRPF+++++VL++ + +G + + + KV +F + RV I+ A T
Sbjct: 308 KLKPLPLETVRPFVYESVVLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQHTGH 367
Query: 176 LRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGLVANPNDLLIMXXXXXXXXXXXXXXXX 355
+QP LPLIRL + Y ES FN IRFG+ + VAN D++
Sbjct: 368 PKQPTLPLIRLRLLYTDESCMFNAIRFGEMLSTRVANVQDVVQFSKVVKRTKTEAVNLDK 427
Query: 356 XGDMTGVAAE-AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAF 532
+ A+ A VE L+ Y+E +K L + + + + + + D
Sbjct: 428 EALRRALEADNATRVEELVDRYFEEAKSNKPLKLFHSKALAEMTYRLLEQRDADAAENIV 487
Query: 533 DAHKRRCIAALLESTAETEKEIAEQLE 613
+K + + L+E+ E I E+LE
Sbjct: 488 KFYKEKAVDHLMEAMPNDE-NIDEELE 513
>AE014297-1413|AAF54724.2| 573|Drosophila melanogaster CG12213-PA,
isoform A protein.
Length = 573
Score = 32.7 bits (71), Expect = 0.57
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +2
Query: 359 GDMTGVAAEAADVESLLRAYYEAQ-PKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFD 535
G + + D E L+ ++AQ K K L + + + V+ KH ED AFD
Sbjct: 82 GQLAEALQKQHDTEHALQEKFDAQVEKYKLLEIKYTNLEAEFVKS-KKKHIEDT--NAFD 138
Query: 536 AHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTL 664
++ +A L + A E+E+A E + L + K+H L
Sbjct: 139 QKLQKVLADLHKDKASKEREVAAWKEKLDK-LQRDGEHKIHAL 180
>AE014297-1412|AAN13537.1| 506|Drosophila melanogaster CG12213-PB,
isoform B protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.57
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +2
Query: 359 GDMTGVAAEAADVESLLRAYYEAQ-PKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFD 535
G + + D E L+ ++AQ K K L + + + V+ KH ED AFD
Sbjct: 82 GQLAEALQKQHDTEHALQEKFDAQVEKYKLLEIKYTNLEAEFVKS-KKKHIEDT--NAFD 138
Query: 536 AHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTL 664
++ +A L + A E+E+A E + L + K+H L
Sbjct: 139 QKLQKVLADLHKDKASKEREVAAWKEKLDK-LQRDGEHKIHAL 180
>X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin
protein.
Length = 1645
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLL 193
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 930 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 987
Query: 194 -PLIRLSIFYERESQNFNR 247
I L FY RE +F +
Sbjct: 988 EDSIHLFGFY-RECDDFEK 1005
>BT011336-1|AAR96128.1| 914|Drosophila melanogaster SD02170p
protein.
Length = 914
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD-L 178
KLT LPL+ I + +EN +++ +KV EFLK R + +++T D +
Sbjct: 466 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK-REGLYSPQMKEIRTDDPI 524
Query: 179 RQPLLP--LIRLSIFYERESQNFNRIRFGQN 265
L+ L S++ R S N + IR G +
Sbjct: 525 ATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 555
>BT001607-1|AAN71362.1| 604|Drosophila melanogaster RE31467p
protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD-L 178
KLT LPL+ I + +EN +++ +KV EFLK R + +++T D +
Sbjct: 456 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK-REGLYSPQMKEIRTDDPI 514
Query: 179 RQPLLP--LIRLSIFYERESQNFNRIRFGQN 265
L+ L S++ R S N + IR G +
Sbjct: 515 ATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 545
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLL 193
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
Query: 194 -PLIRLSIFYERESQNFNR 247
I L FY RE +F +
Sbjct: 975 EDSIHLFGFY-RECDDFEK 992
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLL 193
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
Query: 194 -PLIRLSIFYERESQNFNR 247
I L FY RE +F +
Sbjct: 975 EDSIHLFGFY-RECDDFEK 992
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLL 193
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
Query: 194 -PLIRLSIFYERESQNFNR 247
I L FY RE +F +
Sbjct: 975 EDSIHLFGFY-RECDDFEK 992
>AE013599-3654|AAM68265.1| 904|Drosophila melanogaster CG5411-PB,
isoform B protein.
Length = 904
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD-L 178
KLT LPL+ I + +EN +++ +KV EFLK R + +++T D +
Sbjct: 456 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK-REGLYSPQMKEIRTDDPI 514
Query: 179 RQPLLP--LIRLSIFYERESQNFNRIRFGQN 265
L+ L S++ R S N + IR G +
Sbjct: 515 ATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 545
>AE013599-3653|AAM68264.1| 805|Drosophila melanogaster CG5411-PD,
isoform D protein.
Length = 805
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD-L 178
KLT LPL+ I + +EN +++ +KV EFLK R + +++T D +
Sbjct: 357 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK-REGLYSPQMKEIRTDDPI 415
Query: 179 RQPLLP--LIRLSIFYERESQNFNRIRFGQN 265
L+ L S++ R S N + IR G +
Sbjct: 416 ATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 446
>AE013599-3651|AAM68263.1| 914|Drosophila melanogaster CG5411-PA,
isoform A protein.
Length = 914
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTAD-L 178
KLT LPL+ I + +EN +++ +KV EFLK R + +++T D +
Sbjct: 466 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK-REGLYSPQMKEIRTDDPI 524
Query: 179 RQPLLP--LIRLSIFYERESQNFNRIRFGQN 265
L+ L S++ R S N + IR G +
Sbjct: 525 ATDLIGALLTGPSVYSSRRSSNDSIIRTGSS 555
>BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p
protein.
Length = 294
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 617 KPLVVQQFLFRSLQ*IPIVQQCNDVYEHQMPAARH 513
+PLV QQ L Q P+VQQ + +HQ P+ +H
Sbjct: 39 QPLVQQQQLPLVQQQPPLVQQQQPLVQHQQPSVQH 73
>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
protein.
Length = 2352
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 617 KPLVVQQFLFRSLQ*IPIVQQCNDVYEHQMPAARH 513
+PLV QQ L Q P+VQQ + +HQ P+ +H
Sbjct: 1224 QPLVQQQQLPLVQQQPPLVQQQQPLVQHQQPSVQH 1258
>AY069064-1|AAL39209.1| 759|Drosophila melanogaster GH07892p
protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.0
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +2
Query: 569 ESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVVKL 727
E + E E E+ E + E DE DDEK VDA A SA AA+ VK+
Sbjct: 654 EEEEDGEDEEGEEDEDDEEEEDEEDDEKEEGEVDA-AEESAEAAKPEESAVKI 705
>AE014298-2573|AAF48731.1| 759|Drosophila melanogaster CG8568-PA
protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.0
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +2
Query: 569 ESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVVKL 727
E + E E E+ E + E DE DDEK VDA A SA AA+ VK+
Sbjct: 654 EEEEDGEDEEGEEDEDDEEEEDEEDDEKEEGEVDA-AEESAEAAKPEESAVKI 705
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 515 VLRRAFDAHKRRCIAALLESTAET 586
V++R +D HK RCI +LL T E+
Sbjct: 279 VVQRNWDKHKGRCIKSLLNGTDES 302
>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
protein.
Length = 1398
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 497 LKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEA 640
L N D+L D +KR + + E ET ++ QLE +++L+ A
Sbjct: 574 LMKNNDLLLNELDKYKRNKLETIEEHHEETIVQLEAQLEEARQKLELA 621
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 482 VRDFTLKHNEDVLRRAFDAHKRRCIAAL-----LESTAETEKEIAEQLEVCKRELDEADD 646
+R+ + + AF+A K +AA E A TEK AE+ K E+ + DD
Sbjct: 3416 IRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDD 3475
Query: 647 E 649
E
Sbjct: 3476 E 3476
>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
Length = 2151
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 482 VRDFTLKHNEDVLRRAFDAHKRRCIAAL-----LESTAETEKEIAEQLEVCKRELDEADD 646
+R+ + + AF+A K +AA E A TEK AE+ K E+ + DD
Sbjct: 245 IRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDD 304
Query: 647 E 649
E
Sbjct: 305 E 305
>AE014298-2167|AAF48467.2| 1208|Drosophila melanogaster CG33206-PB,
isoform B protein.
Length = 1208
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 497 LKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEA 640
L N D+L D +KR + + E ET ++ QLE +++L+ A
Sbjct: 384 LMKNNDLLLNELDKYKRNKLETIEEHHEETIVQLEAQLEEARQKLELA 431
>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
isoform A protein.
Length = 1398
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 497 LKHNEDVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEA 640
L N D+L D +KR + + E ET ++ QLE +++L+ A
Sbjct: 574 LMKNNDLLLNELDKYKRNKLETIEEHHEETIVQLEAQLEEARQKLELA 621
>AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB,
isoform B protein.
Length = 2151
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 482 VRDFTLKHNEDVLRRAFDAHKRRCIAAL-----LESTAETEKEIAEQLEVCKRELDEADD 646
+R+ + + AF+A K +AA E A TEK AE+ K E+ + DD
Sbjct: 245 IRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDD 304
Query: 647 E 649
E
Sbjct: 305 E 305
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 482 VRDFTLKHNEDVLRRAFDAHKRRCIAAL-----LESTAETEKEIAEQLEVCKRELDEADD 646
+R+ + + AF+A K +AA E A TEK AE+ K E+ + DD
Sbjct: 3416 IRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDD 3475
Query: 647 E 649
E
Sbjct: 3476 E 3476
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,290,085
Number of Sequences: 53049
Number of extensions: 468611
Number of successful extensions: 1618
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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