Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9n01
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical ... 31 0.68
Z78064-5|CAB01511.1| 473|Caenorhabditis elegans Hypothetical pr... 31 0.90
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.90
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.90
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.90
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p... 30 2.1
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p... 30 2.1
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.8
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 29 3.6
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical pr... 28 6.4
AB011285-1|BAA24965.1| 275|Caenorhabditis elegans GAP-2-9 protein. 28 6.4
Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 49.6 bits (113), Expect = 2e-06
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Frame = +2
Query: 11 PLPLQTVRPFIFKTIVLSEENIGSEDVNENEK--------VQEF-LKNRVNEAIDEASKL 163
P+PLQTVRP + ++L + GS + + ++ + E ++ ++NE I A
Sbjct: 359 PIPLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAK 418
Query: 164 KTADLRQPLLPLIRLSIFYERESQNF---NRIRFGQNFNGLVANPNDLLIMXXXXXXXXX 334
+ RQP LPLIRL + Y+ + N N R G + +VAN D++ +
Sbjct: 419 RRP--RQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEG 476
Query: 335 XXXXXXXXGDMTGVAAE-----AADVESLLRAYYEAQPKDKRLSVLSVRVITDAVRDFT 496
++T +A E A ++++++ Y+ QP +++VL I A+ ++
Sbjct: 477 KLQTENEK-NITEMADEMGQVSATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYS 534
>AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical
protein Y54E5A.6 protein.
Length = 436
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 419 YEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAETEKEI 598
Y + DK+L + + RV+ +A+ ++ +D++ R K RCI + ++ E +I
Sbjct: 35 YTEEIVDKKL-IEATRVVNEALGTIDYRNGDDIILRLAPEEKGRCILQIGTNSGEKAAKI 93
Query: 599 AE 604
A+
Sbjct: 94 AQ 95
>Z78064-5|CAB01511.1| 473|Caenorhabditis elegans Hypothetical
protein F57B1.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 476 DAVRDFTLKHNEDVLRRAFDAHKRRCIAAL--LESTAETEKEIAEQLEVCKRELDEADDE 649
D DF H E +L + K +A+ L+ + EI++ L+ K+E+D+A
Sbjct: 174 DKQLDFKTDHLEKLLENVLEHSKGWKESAIEELKQIKLWQAEISDALQQMKKEIDDAKST 233
Query: 650 KLHTLVDASARPSAPAAQL 706
K+ A +AP A L
Sbjct: 234 KIIHSTPEKAPETAPTASL 252
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 374 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 544
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 545 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 658
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 374 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 544
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 545 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 658
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 374 VAAEAADVES-LLRAYYEAQPKDKRLSVLS--VRVITDAVRDFTLKHNEDVLRRAFDAHK 544
VA + A VE+ L RA A+ + ++ L +RV+ + ++ + + + R +
Sbjct: 165 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQ 224
Query: 545 RRCIAALLESTAETEKEIAEQ-LEVCKRELDEADDEKLH 658
R +++ L+ AET E AE+ ++ ++E+D +DE +H
Sbjct: 225 IRTVSSRLKE-AETRAEFAERSVQKLQKEVDRLEDELVH 262
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 38 FIFKTIVLSEENIGSEDVNEN---EKVQEFLKNRVNEAIDEASKLKT 169
++ K I++ +N+ + ++N + + F+ RVN +ID+ K+KT
Sbjct: 178 YLMKGILIEADNLVKNNYSQNSIKQLLSMFIHRRVNRSIDDIQKMKT 224
>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 89 VNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIF 217
+NEN+ +E L NR N AID + K A + PLIR +F
Sbjct: 996 INENQAAEE-LVNRTNLAIDWNAASKRAGFELSVDPLIRDMLF 1037
>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 89 VNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIF 217
+NEN+ +E L NR N AID + K A + PLIR +F
Sbjct: 996 INENQAAEE-LVNRTNLAIDWNAASKRAGFELSVDPLIRDMLF 1037
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 533 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 652
DA R + LES + EI +Q+E K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 533 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 652
DA R + LES + EI +Q+E K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 404 LLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAE 583
LL A AQ ++ + + R+IT D + +D LRR + +++ +E+ E
Sbjct: 307 LLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQ--AQKKIENLDE 364
Query: 584 TEKEIAEQLEVCKRELDEA 640
T K+ Q+ R LDEA
Sbjct: 365 TIKQQETQIRDLGRSLDEA 383
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 404 LLRAYYEAQPKDKRLSVLSVRVITDAVRDFTLKHNEDVLRRAFDAHKRRCIAALLESTAE 583
LL A AQ ++ + + R+IT D + +D LRR + +++ +E+ E
Sbjct: 307 LLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQ--AQKKIENLDE 364
Query: 584 TEKEIAEQLEVCKRELDEA 640
T K+ Q+ R LDEA
Sbjct: 365 TIKQQETQIRDLGRSLDEA 383
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 5 LTPLPLQTVRPFIFKTIVLSEENIGSEDVNE-NEKVQEFLKN--RVNEAIDEASKLKTAD 175
L L L T+ +I+ S ++ + V N ++EF K+ V A+D+ S ++T +
Sbjct: 26 LKSLNLGTIATIDVDSIIKSLDDGSDKSVAAVNTTLEEFAKSIATVTSALDKTSSMETLE 85
Query: 176 LRQPLLPLIRLSIFYERESQNFNRIRFGQNFNGL 277
+P+ +L +Y+ + + + GL
Sbjct: 86 TLKPITNYAKLFQYYDNSQAIYIKAATDDDIKGL 119
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +2
Query: 38 FIFKTIVLSEENIGSEDVNEN-EKVQEFLKNRVNEAIDEASK-------LKTADLRQPLL 193
F+ T L E S D ++ EKV + +NR + +ID+ SK L+T++L+ ++
Sbjct: 2926 FLSSTKSLREHTDTSIDRKKSGEKVHSYYRNRTDTSIDKRSKPEVITEDLETSELQDEIM 2985
Query: 194 PLIRLSIFYERESQNFNRIRFGQN 265
L+ + + + N I+ QN
Sbjct: 2986 KLVFVEPSVSKSDSSAN-IKASQN 3008
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +2
Query: 38 FIFKTIVLSEENIGSEDVNEN-EKVQEFLKNRVNEAIDEASK-------LKTADLRQPLL 193
F+ T L E S D ++ EKV + +NR + +ID+ SK L+T++L+ ++
Sbjct: 2926 FLSSTKSLREHTDTSIDRKKSGEKVHSYYRNRTDTSIDKRSKPEVITEDLETSELQDEIM 2985
Query: 194 PLIRLSIFYERESQNFNRIRFGQN 265
L+ + + + N I+ QN
Sbjct: 2986 KLVFVEPSVSKSDSSAN-IKASQN 3008
>Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical
protein ZK899.8j protein.
Length = 790
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 127
P+ +I S EN+ E NEN K++ LKN
Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49
>Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical
protein ZK899.8g protein.
Length = 787
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 127
P+ +I S EN+ E NEN K++ LKN
Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49
>AB011285-1|BAA24965.1| 275|Caenorhabditis elegans GAP-2-9 protein.
Length = 275
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 127
P+ +I S EN+ E NEN K++ LKN
Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49
>Z83234-7|CAB76745.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +2
Query: 47 KTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIFYER 226
+++ E+ E++ +NE +E R+ + + + +K K AD L+P + Y
Sbjct: 36 RSLKKDEKRRQKEEMKKNESAEEKRARRMEKKMRKDAKRKDADAEDTLIP---PELNYTN 92
Query: 227 ESQNFNRIRFGQNF 268
+ FN + Q F
Sbjct: 93 LNNPFNDTKLTQTF 106
>Z82067-4|CAB76738.1| 667|Caenorhabditis elegans Hypothetical
protein W03H9.4 protein.
Length = 667
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +2
Query: 47 KTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQPLLPLIRLSIFYER 226
+++ E+ E++ +NE +E R+ + + + +K K AD L+P + Y
Sbjct: 36 RSLKKDEKRRQKEEMKKNESAEEKRARRMEKKMRKDAKRKDADAEDTLIP---PELNYTN 92
Query: 227 ESQNFNRIRFGQNF 268
+ FN + Q F
Sbjct: 93 LNNPFNDTKLTQTF 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,533,427
Number of Sequences: 27780
Number of extensions: 232795
Number of successful extensions: 939
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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