Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9m22
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075542-1|AAL68349.1|  120|Drosophila melanogaster RH34338p pro...    98   1e-20
AE014296-708|AAF47804.2|  120|Drosophila melanogaster CG14977-PA...    97   2e-20
AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH0838...    81   1e-15
AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA ...    81   1e-15

>AY075542-1|AAL68349.1|  120|Drosophila melanogaster RH34338p
           protein.
          Length = 120

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 42/79 (53%), Positives = 63/79 (79%)
 Frame = +3

Query: 96  IPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKISIT 275
           +P+QIGYLVL EDGAVLESGG+L+NDER A +I  L+ L+  +D  +F PS + ++I+I 
Sbjct: 11  VPNQIGYLVLKEDGAVLESGGDLKNDERSANVIMGLLNLTETIDE-SFMPSSSCERITID 69

Query: 276 FDDHWYIICLSNKKIYVVK 332
           ++ H+Y IC+SN++IY++K
Sbjct: 70  YEHHYYSICMSNRRIYIIK 88


>AE014296-708|AAF47804.2|  120|Drosophila melanogaster CG14977-PA
           protein.
          Length = 120

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 41/79 (51%), Positives = 63/79 (79%)
 Frame = +3

Query: 96  IPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKISIT 275
           +P+QIGYL+L EDGAVLESGG+L+NDER A +I  L+ L+  +D  +F PS + ++I+I 
Sbjct: 11  VPNQIGYLILKEDGAVLESGGDLKNDERSANVIMGLLNLTETIDE-SFMPSSSCERITID 69

Query: 276 FDDHWYIICLSNKKIYVVK 332
           ++ H+Y IC+SN++IY++K
Sbjct: 70  YEHHYYSICMSNRRIYIIK 88


>AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH08388
           protein.
          Length = 556

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +2

Query: 398 MARNILMSSLENASFNILIQILFRCITFIINAWVIRNVGHEILGIMNVRXXXXXXXXXXX 577
           MARN+L SSL  A F+I+ QIL R +TF INA+++R+VG E+LGIMNVR           
Sbjct: 1   MARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRLLLLESTLLFL 60

Query: 578 SREPFNRACLG----RTDGFGWSHLINQ 649
           SRE  NRA L     + D   W+ LINQ
Sbjct: 61  SREAINRAALSANAQQGDRCSWAQLINQ 88


>AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA
           protein.
          Length = 556

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +2

Query: 398 MARNILMSSLENASFNILIQILFRCITFIINAWVIRNVGHEILGIMNVRXXXXXXXXXXX 577
           MARN+L SSL  A F+I+ QIL R +TF INA+++R+VG E+LGIMNVR           
Sbjct: 1   MARNVLESSLLGAGFSIIFQILCRILTFGINAYIVRHVGREVLGIMNVRLLLLESTLLFL 60

Query: 578 SREPFNRACLG----RTDGFGWSHLINQ 649
           SRE  NRA L     + D   W+ LINQ
Sbjct: 61  SREAINRAALSANAQQGDRCSWAQLINQ 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,941,262
Number of Sequences: 53049
Number of extensions: 513210
Number of successful extensions: 1227
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)