Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9m18
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   7.9  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   7.9  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 63  KVAEHLVKNRLEWFIE 16
           KV  HL+KN+  W+ E
Sbjct: 84  KVIRHLIKNKPSWWQE 99


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 63  KVAEHLVKNRLEWFIE 16
           KV  HL+KN+  W+ E
Sbjct: 85  KVLHHLIKNKPNWWQE 100


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 63  KVAEHLVKNRLEWFIE 16
           KV  HL++N+  W+ E
Sbjct: 85  KVIHHLIENKPNWWQE 100


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 63  KVAEHLVKNRLEWFIE 16
           KV  HL++N+  W+ E
Sbjct: 85  KVIHHLIENKPNWWQE 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,888
Number of Sequences: 336
Number of extensions: 3034
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)