Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9m18
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 61 2e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 50 3e-06
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 42 0.001
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 39 0.008
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 38 0.014
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 37 0.033
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 37 0.033
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.033
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 37 0.033
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.033
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.033
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 36 0.044
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 36 0.044
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 35 0.13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 35 0.13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 35 0.13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 35 0.13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 32 0.94
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 30 3.8
AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p pro... 30 3.8
AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-P... 30 3.8
AY122264-1|AAM52776.1| 311|Drosophila melanogaster SD14666p pro... 29 8.7
AE014296-2771|AAF49436.1| 307|Drosophila melanogaster CG4098-PA... 29 8.7
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 60.9 bits (141), Expect = 2e-09
Identities = 54/195 (27%), Positives = 80/195 (41%)
Frame = -2
Query: 704 YTCLRDDRYDGYGGVALLVRNSIDFSRISFSSLISNDAINIVGIKIDNISIVSIYLARXX 525
Y L + + +GGV LLV SI + ++ + I AINI K+ ++I S Y++
Sbjct: 51 YKLLTNIATNRFGGVRLLVHKSIQHTVLNITIDIEAIAINIES-KL-KLNIFSTYISPTK 108
Query: 524 XXXXXXXXXXXXXXXXXXXXLGDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSP 345
GDFN H +G TT+ G +D +L LLN SP
Sbjct: 109 NITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSP 168
Query: 344 TRRTKPNEKPSAVDLSICTPDLAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRV 165
T + N + +DL++C+P LA SDHF ++ R
Sbjct: 169 THFSTHNTY-THIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFPTTN--PQKFYRP 225
Query: 164 KYKLNNADWSAFKNL 120
+KL A+W F L
Sbjct: 226 FFKLKEANWEQFNAL 240
Score = 35.9 bits (79), Expect = 0.058
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 102 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFI 1
+SYRPI+L+ + K+ + ++ RL W + NN I
Sbjct: 506 SSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLI 539
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 50.0 bits (114), Expect = 3e-06
Identities = 42/184 (22%), Positives = 76/184 (41%)
Frame = -2
Query: 665 GVALLVRNSIDFSRISFSSLISNDAINIVGIKIDNISIVSIYLARXXXXXXXXXXXXXXX 486
G+ +L++ ++ + + +S I A+ + ++ I+IV+ Y+
Sbjct: 68 GIGVLIKRNVPHTYRNINSSILCSALQLNFEQV--INIVNAYIPPSQIFSSSDISEILQN 125
Query: 485 XXXXXXXLGDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAV 306
LGD N ++G T+T G + ++ +L +LN GSPT + N + +
Sbjct: 126 LNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLSTHNTF-THI 184
Query: 305 DLSICTPDLAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFK 126
D+S+ +P +A SDHF P +P KYK + A+W F
Sbjct: 185 DISLISPQIAHMCSWSISDNLHGSDHFPITIHINTPTRP-DNTLPLPKYKTDQANWKRFN 243
Query: 125 NLVE 114
E
Sbjct: 244 ESCE 247
Score = 42.7 bits (96), Expect = 5e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -1
Query: 111 NDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFI 1
+D+ SYRPI+L S L K E ++ RL WFI+ +N I
Sbjct: 508 SDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLI 544
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 41.5 bits (93), Expect = 0.001
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 7/155 (4%)
Frame = -2
Query: 737 LKPGYLFKVPGYTCLRDDR----YDGYGGVALLVRNSIDF--SRISFSSLISNDAINIVG 576
LK G K+ GY R + GGVA+ VR ++ R+ + I ++ V
Sbjct: 40 LKRGETVKIYGYAYYPAYRPSLNNNSVGGVAVFVRTTLRHFPQRVIETRHIQLSSVK-VA 98
Query: 575 IKIDNISIVSIYLARXXXXXXXXXXXXXXXXXXXXXXLGDFNCHHQMFGCGTTDTNGVHL 396
+ ++ +IY + GD+N H ++G G L
Sbjct: 99 TGLGDLQFSAIYCSPSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGREL 158
Query: 395 VEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSI 294
E L + +L TGSPTR P+ PS +D ++
Sbjct: 159 AEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAV 193
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 99 SYRPIALSSVLTKVAEHLVKNRL 31
SYRPI+L S L+K+ E L+ NRL
Sbjct: 513 SYRPISLLSSLSKLWERLIANRL 535
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 38.7 bits (86), Expect = 0.008
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = -2
Query: 722 LFKVPGYTCLRDDRYDGYGGVALLVRNSI-DFSRISFSSLISNDAINIVGIKIDNISIVS 546
LF YT + GG A+L++NS+ F ++ A ++ + IS +
Sbjct: 48 LFGFVAYTANDPSGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGA 107
Query: 545 IYLARXXXXXXXXXXXXXXXXXXXXXXLGDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC 366
+Y GD+N H ++G G ++ G+ L ++ +
Sbjct: 108 VYCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVD 167
Query: 365 LLNTGSPTR 339
L TG PTR
Sbjct: 168 SLATGGPTR 176
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 37.9 bits (84), Expect = 0.014
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L + + ++ ++ TGS T K PSA+D SIC
Sbjct: 164 GDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC 222
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 111 NDVASYRPIALSSVLTKVAEHLVKNRL 31
N+ SYRPI+L S L+K+ E L+ RL
Sbjct: 565 NEPKSYRPISLLSGLSKMFERLLLKRL 591
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 111 NDVASYRPIALSSVLTKVAEHLVKNRL 31
N+ SYRPI+L S L+K+ E L+ RL
Sbjct: 553 NEPRSYRPISLLSGLSKIFERLLLKRL 579
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 36 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 94
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 114 INDVASYRPIALSSVLTKVAEHLVKNRL 31
+ND SYRPI+L S L+K+ E L+ RL
Sbjct: 436 VNDPKSYRPISLLSGLSKMFERLLLKRL 463
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 114 INDVASYRPIALSSVLTKVAEHLVKNRL 31
+ND SYRPI+L S L+K+ E L+ RL
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 114 INDVASYRPIALSSVLTKVAEHLVKNRL 31
+ND SYRPI+L S L+K+ E L+ RL
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 114 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 172
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 114 INDVASYRPIALSSVLTKVAEHLVKNRL 31
+ND SYRPI+L S L+K+ E L+ RL
Sbjct: 514 VNDPKSYRPISLLSGLSKMFERLLLKRL 541
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.033
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLC-LLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+N H+ +GC G L E + + ++ TG T K PSA+D SIC
Sbjct: 152 GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC 210
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1
Query: 114 INDVASYRPIALSSVLTKVAEHLVKNRL 31
+ND SYRPI+L S L+K+ E L+ RL
Sbjct: 552 VNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 36.3 bits (80), Expect = 0.044
Identities = 29/120 (24%), Positives = 43/120 (35%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 282
GDFN H+ + C + G L E+ DL +L PT N K A L +C +
Sbjct: 160 GDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPT-YIPHNHKAKASTLDLCLTN 218
Query: 281 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESMML 102
+ SDH K P L A+W+ FK ++ ++
Sbjct: 219 IPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYP----ILGRANWALFKRIINERLM 274
Score = 35.9 bits (79), Expect = 0.058
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -2
Query: 719 FKVPGYTCLRDDRYDGY-GGVALLVRNSIDFSRISF--SSLISNDAINIVGIKIDNISIV 549
F +P YT R+DR + GGVA+ V N++ +I S +I N I I ++ I
Sbjct: 54 FNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIY 113
Query: 548 SIYLA 534
SIY A
Sbjct: 114 SIYFA 118
Score = 33.9 bits (74), Expect = 0.23
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 99 SYRPIALSSVLTKVAEHLVKNRLEWFIENNN 7
SYRPI+L S L+K+ E L+K RL F++ +N
Sbjct: 537 SYRPISLLSGLSKILEKLIKLRLVKFLDIHN 567
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 36.3 bits (80), Expect = 0.044
Identities = 29/120 (24%), Positives = 43/120 (35%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 282
GDFN H+ + C + G L E+ DL +L PT N K A L +C +
Sbjct: 108 GDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPT-YIPHNHKAKASTLDLCLTN 166
Query: 281 LAXXXXXXXXXXXXXSDHFXXXXXXXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESMML 102
+ SDH K P L A+W+ FK ++ ++
Sbjct: 167 IPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYP----ILGRANWALFKRIINERLM 222
Score = 35.9 bits (79), Expect = 0.058
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -2
Query: 719 FKVPGYTCLRDDRYDGY-GGVALLVRNSIDFSRISF--SSLISNDAINIVGIKIDNISIV 549
F +P YT R+DR + GGVA+ V N++ +I S +I N I I ++ I
Sbjct: 2 FNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61
Query: 548 SIYLA 534
SIY A
Sbjct: 62 SIYFA 66
Score = 33.9 bits (74), Expect = 0.23
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 99 SYRPIALSSVLTKVAEHLVKNRLEWFIENNN 7
SYRPI+L S L+K+ E L+K RL F++ +N
Sbjct: 485 SYRPISLLSGLSKILEKLIKLRLVKFLDIHN 515
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 34.7 bits (76), Expect = 0.13
Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 4/214 (1%)
Frame = -2
Query: 737 LKPGYLFKVPGYTCLRDDRYDGY--GGVALLVRNSIDFSRISFSSLISNDAINI-VGIKI 567
++ G +PGY G GG A+++++ + S ++ S + + +
Sbjct: 42 MRVGQRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSV 101
Query: 566 DNISIVSIYLARXXXXXXXXXXXXXXXXXXXXXXLGDFNCHHQMFGCGTTDTNGVHLVEI 387
+++ ++YL GD+N H +G + G L E+
Sbjct: 102 GTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEV 161
Query: 386 LDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSICTPDLAXXXXXXXXXXXXXSDHFXXXXX 210
+ +L TG PT + P PSA+D I T SDH
Sbjct: 162 IAHGQYQVLATGEPTFYSYNPLLTPSALDFFI-TCGYGMGRLDVQTLQELSSDHLPILAV 220
Query: 209 XXXXXXPYQKRIPRVKYKLNNADWSAFKNLVESM 108
K+ RV+ +NAD + FK +E +
Sbjct: 221 LHATPL---KKPQRVRLLAHNADINIFKTHLEQL 251
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 108 DVASYRPIALSSVLTKVAEHLVKNRL 31
DV SYRP +L L K+ E L+ NRL
Sbjct: 511 DVDSYRPTSLLPSLGKIMERLILNRL 536
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 461 GDFNCHHQMFGCGTTDTNGVHLVE-ILDLQNLCLLNTGSPTRRTKPNEK-PSAVDLSIC 291
GD+NC H+++G + G L + IL ++L ++ TG T +K PSA+D +IC
Sbjct: 156 GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAIC 214
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -1
Query: 108 DVASYRPIALSSVLTKVAEHLVKNRL 31
DV SYRPI+L L K+ E L+ NRL
Sbjct: 313 DVDSYRPISLLPSLGKIMERLILNRL 338
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Frame = -2
Query: 737 LKPGYLFKVPGYTCLRDDRYDGY--GGVALLVRNSIDFSRISFSSLISNDAINI-VGIKI 567
++ G +PGY G GG A+++++ + S ++ S + + +
Sbjct: 42 MRVGQRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSV 101
Query: 566 DNISIVSIYLARXXXXXXXXXXXXXXXXXXXXXXLGDFNCHHQMFGCGTTDTNGVHLVEI 387
+++ ++YL GD+N H +G + G L E+
Sbjct: 102 GTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEV 161
Query: 386 LDLQNLCLLNTGSPT 342
+ +L TG PT
Sbjct: 162 IAHGQYQVLATGEPT 176
>AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p protein.
Length = 1710
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 649 TSNATPP*PSYLSSRKQVYPGTLNRYPGF 735
TSNA+PP PS+ + P LN GF
Sbjct: 969 TSNASPPNPSHSRQESHISPAPLNLIGGF 997
>AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-PA
protein.
Length = 1710
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 649 TSNATPP*PSYLSSRKQVYPGTLNRYPGF 735
TSNA+PP PS+ + P LN GF
Sbjct: 969 TSNASPPNPSHSRQESHISPAPLNLIGGF 997
>AY122264-1|AAM52776.1| 311|Drosophila melanogaster SD14666p
protein.
Length = 311
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 297 NLYPRSCFFSFLVHLIIYFWQ*SFPDYHILSY*TPSL 187
N+YPRS + V FW FPDY +Y P +
Sbjct: 49 NMYPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHI 85
>AE014296-2771|AAF49436.1| 307|Drosophila melanogaster CG4098-PA
protein.
Length = 307
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 297 NLYPRSCFFSFLVHLIIYFWQ*SFPDYHILSY*TPSL 187
N+YPRS + V FW FPDY +Y P +
Sbjct: 45 NMYPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHI 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,573,063
Number of Sequences: 53049
Number of extensions: 487758
Number of successful extensions: 988
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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