Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9m15
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.2  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 84  YVGSDANWRNLRT 122
           ++  DA WRNLRT
Sbjct: 116 FISKDAVWRNLRT 128


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 548 PTLAPERPEISLTTSIDNPPETEQP 622
           P   P++ E+SL+ +  + PE E+P
Sbjct: 55  PQFEPQQFEVSLSENRSHEPEMERP 79


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 548 PTLAPERPEISLTTSIDNPPETEQP 622
           P   P++ E+SL+ +  + PE E+P
Sbjct: 75  PQFEPQQFEVSLSENRSHEPEMERP 99


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/51 (21%), Positives = 22/51 (43%)
 Frame = +2

Query: 458 HRNPSPFTARWIEVTGIRDAFLKISKTDNYPTLAPERPEISLTTSIDNPPE 610
           H+   P     ++++      LK ++   YP   P+   +S    + NPP+
Sbjct: 239 HQPIYPAVTATVQLSTCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNPPD 289


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +2

Query: 404 DETETLWAVDGDHYCSYVHRNPSPFTARWIEVTGIRDAFLKISKTDNY 547
           DE +  +AV+GD +  +          +WI+  G   A +     D++
Sbjct: 387 DEMKVPYAVNGDQWIGFDDEKSIRNKMKWIKDNGFAGAMVWTIDMDDF 434



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 320 GKWGPEETTAYRLYPFKVNKQFTIEIVVDETETLW 424
           GKW  E      LY    + Q+  ++ V+    LW
Sbjct: 283 GKWERETGHNAPLYSPSSDSQYQKQLNVEHAANLW 317


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 530 SKTDNYPTLAPERPEIS 580
           ++++ YPT  P RP ++
Sbjct: 374 ARSNKYPTRVPHRPYVA 390


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 217 YCEPWY 200
           YC+PWY
Sbjct: 33  YCDPWY 38


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 299 VRNTRRRGKWGPEETTA 349
           V+ T + G+W PE++T+
Sbjct: 427 VQTTPKPGQWVPEKSTS 443


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/37 (18%), Positives = 18/37 (48%)
 Frame = -1

Query: 406 IYYYFYRKLLVHFERV*PVCRCFFRTPFPAATCVPHY 296
           +YY++Y  ++     +  +C  +F  P     C+ ++
Sbjct: 113 VYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,361
Number of Sequences: 336
Number of extensions: 3642
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)