Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9m12
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    27   0.11 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 160 ISQCFMETVSAVFIGGFLLVLGTTQIVIYKSHATE-VMDVRSSKLFGVQMF 309
           + Q  +E +    +GGFLL+L     +++ SH  E ++    + L G  +F
Sbjct: 99  VDQYLLEQLVCEQLGGFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSIF 149


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = +1

Query: 283 SKLFGVQMFFTLLVPVLAVIRFLLQALLFKSGCVYGYMVVALTVTLVVFPLSAYLAILER 462
           ++ FG+Q+   L V V+     +   L+F SG       V++   L+++ L + L ++ +
Sbjct: 227 NECFGLQILGILFVGVIYTTYTIFLLLIFGSGSATPENNVSVVYVLILYILESLLYMVTK 286


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 385 YGYMVVALTVTLVVFPLSAYLAILE 459
           YG+++VA  + LV+F L+ +  I+E
Sbjct: 115 YGFVIVAHLLFLVIFVLNIWCWIVE 139


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/34 (26%), Positives = 12/34 (35%)
 Frame = +3

Query: 138 RDMGGSRHITMFHGDRICCVHRWIPIGLGNHTNC 239
           R      H T+   D I   + W P    +  NC
Sbjct: 173 RQSSSLEHCTLIGEDNISAKNPWFPRHASDLDNC 206


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 303 DVFYSFSTSVGCNKVSVTSIIVQKWLCVWLYGSCINSYSGSI 428
           D   S +++V C+ V     I++K L       C  S SGS+
Sbjct: 638 DYVPSGNSTVDCDDVGTFGAILKKLLPKVYEDYCPTSNSGSV 679


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 499  GFVLLVFWAMIFV 537
            GFV L+F+A++ V
Sbjct: 1284 GFVFLIFFALLMV 1296


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 499  GFVLLVFWAMIFV 537
            GFV L+F+A++ V
Sbjct: 1284 GFVFLIFFALLMV 1296


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 280 SSKLFGVQMFFTLLVPVLAVIRFLLQALLFK 372
           +++ +G+    T L  V AV+ FL+  L F+
Sbjct: 259 AARFYGIDFSNTFLGLVGAVVTFLIVLLQFQ 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,484
Number of Sequences: 336
Number of extensions: 4677
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)