Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9m05
         (348 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030156-1|AAH30156.2|  936|Homo sapiens DIP2B protein protein.        28   7.0  
BC007671-1|AAH07671.2|  936|Homo sapiens DIP2B protein protein.        28   7.0  
AK097369-1|BAC05025.1|  765|Homo sapiens protein ( Homo sapiens ...    28   7.0  
AB040896-1|BAA95987.2| 1166|Homo sapiens KIAA1463 protein protein.     28   7.0  

>BC030156-1|AAH30156.2|  936|Homo sapiens DIP2B protein protein.
          Length = 936

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 56  GQINESRIFRKHQTLLEQIQYR 121
           GQI E+ + RKHQ L E +Q+R
Sbjct: 337 GQIEENDLVRKHQFLAEILQWR 358


>BC007671-1|AAH07671.2|  936|Homo sapiens DIP2B protein protein.
          Length = 936

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 56  GQINESRIFRKHQTLLEQIQYR 121
           GQI E+ + RKHQ L E +Q+R
Sbjct: 337 GQIEENDLVRKHQFLAEILQWR 358


>AK097369-1|BAC05025.1|  765|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40050 fis, clone SYNOV3000184. ).
          Length = 765

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 56  GQINESRIFRKHQTLLEQIQYR 121
           GQI E+ + RKHQ L E +Q+R
Sbjct: 166 GQIEENDLVRKHQFLAEILQWR 187


>AB040896-1|BAA95987.2| 1166|Homo sapiens KIAA1463 protein protein.
          Length = 1166

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 56  GQINESRIFRKHQTLLEQIQYR 121
           GQI E+ + RKHQ L E +Q+R
Sbjct: 567 GQIEENDLVRKHQFLAEILQWR 588


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,834,937
Number of Sequences: 237096
Number of extensions: 563448
Number of successful extensions: 846
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)