Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9l24
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065700-1|AAH65700.1| 250|Homo sapiens Shwachman-Bodian-Diamon... 146 3e-35
AY169963-1|AAN77490.1| 250|Homo sapiens Shwachman-Bodian-Diamon... 146 3e-35
AK001779-1|BAA91905.1| 250|Homo sapiens protein ( Homo sapiens ... 146 3e-35
AF151855-1|AAD34092.1| 250|Homo sapiens CGI-97 protein protein. 139 6e-33
BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein. 32 0.94
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein. 32 0.94
AY422473-1|AAR13704.1| 1326|Homo sapiens myosin tail domain-cont... 29 8.8
AL662788-1|CAI95333.1| 1326|Homo sapiens chromosome 9 open readi... 29 8.8
AL592153-1|CAI95316.1| 1326|Homo sapiens chromosome 9 open readi... 29 8.8
AL359877-3|CAI94977.1| 1326|Homo sapiens chromosome 9 open readi... 29 8.8
>BC065700-1|AAH65700.1| 250|Homo sapiens Shwachman-Bodian-Diamond
syndrome protein.
Length = 250
Score = 146 bits (355), Expect = 3e-35
Identities = 68/125 (54%), Positives = 94/125 (75%)
Frame = -1
Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
+Q++ +F+DIAT VADKCVNPETKRPY V +IE+A+KD+H+SV NKS KQQAL+VI+ L
Sbjct: 102 TQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQL 161
Query: 303 KNEIPIERAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRSL 124
K ++ IERA MR+R +L + +K K+K+ L +E E++ IVCLIDPG FR +
Sbjct: 162 KEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDY-GQQLEIVCLIDPGCFREI 220
Query: 123 DEMIR 109
DE+I+
Sbjct: 221 DELIK 225
>AY169963-1|AAN77490.1| 250|Homo sapiens Shwachman-Bodian-Diamond
syndrome protein protein.
Length = 250
Score = 146 bits (355), Expect = 3e-35
Identities = 68/125 (54%), Positives = 94/125 (75%)
Frame = -1
Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
+Q++ +F+DIAT VADKCVNPETKRPY V +IE+A+KD+H+SV NKS KQQAL+VI+ L
Sbjct: 102 TQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQL 161
Query: 303 KNEIPIERAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRSL 124
K ++ IERA MR+R +L + +K K+K+ L +E E++ IVCLIDPG FR +
Sbjct: 162 KEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDY-GQQLEIVCLIDPGCFREI 220
Query: 123 DEMIR 109
DE+I+
Sbjct: 221 DELIK 225
>AK001779-1|BAA91905.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ10917 fis, clone OVARC1000321. ).
Length = 250
Score = 146 bits (355), Expect = 3e-35
Identities = 68/125 (54%), Positives = 94/125 (75%)
Frame = -1
Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
+Q++ +F+DIAT VADKCVNPETKRPY V +IE+A+KD+H+SV NKS KQQAL+VI+ L
Sbjct: 102 TQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQL 161
Query: 303 KNEIPIERAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRSL 124
K ++ IERA MR+R +L + +K K+K+ L +E E++ IVCLIDPG FR +
Sbjct: 162 KEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDY-GQQLEIVCLIDPGCFREI 220
Query: 123 DEMIR 109
DE+I+
Sbjct: 221 DELIK 225
>AF151855-1|AAD34092.1| 250|Homo sapiens CGI-97 protein protein.
Length = 250
Score = 139 bits (336), Expect = 6e-33
Identities = 66/125 (52%), Positives = 91/125 (72%)
Frame = -1
Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
+Q+ +F+DIAT VADKCVNPETK PY V +IE+A+KD+H+ V NKS KQQAL+VI+ L
Sbjct: 102 TQLGQMFRDIATFVADKCVNPETKGPYTVILIERAMKDIHYLVKPNKSTKQQALEVIKQL 161
Query: 303 KNEIPIERAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRSL 124
K ++ IERA MR+R +L + +K K+K+ L +E E++ IVCLIDPG FR +
Sbjct: 162 KEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDY-GQQLEIVCLIDPGCFREI 220
Query: 123 DEMIR 109
DE+I+
Sbjct: 221 DELIK 225
>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
Length = 1581
Score = 32.3 bits (70), Expect = 0.94
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -1
Query: 417 TKRPYPVSIIEKAIKDVHFSVNVNKSAKQQAL--DVIQILKNEIPIERAQMRVRILLTGK 244
TK P P + E IK + V KS + L DV+++ K + +R ++ VRI
Sbjct: 594 TKMPNPHYLPEVCIKVTIINFTVTKSGLEDQLLSDVVRLEKPRLEEQRIKLIVRINTDKN 653
Query: 243 DARKTKDKVVKLATTVE 193
+ ++K++++ T E
Sbjct: 654 QLKTIEEKILRMLFTSE 670
>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
Length = 2182
Score = 32.3 bits (70), Expect = 0.94
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -1
Query: 417 TKRPYPVSIIEKAIKDVHFSVNVNKSAKQQAL--DVIQILKNEIPIERAQMRVRILLTGK 244
TK P P + E IK + V KS + L DV+++ K + +R ++ VRI
Sbjct: 1195 TKMPNPHYLPEVCIKVTIINFTVTKSGLEDQLLSDVVRLEKPRLEEQRIKLIVRINTDKN 1254
Query: 243 DARKTKDKVVKLATTVE 193
+ ++K++++ T E
Sbjct: 1255 QLKTIEEKILRMLFTSE 1271
>AY422473-1|AAR13704.1| 1326|Homo sapiens myosin tail
domain-containing protein protein.
Length = 1326
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 441 ADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEI-PIERAQMR 268
A++ + E+K + II+ I+D+ ++ V K+++ +A+ ++I+KNE +E A R
Sbjct: 289 AERAAHLESK--FNSEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYER 345
>AL662788-1|CAI95333.1| 1326|Homo sapiens chromosome 9 open reading
frame 93 protein.
Length = 1326
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 441 ADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEI-PIERAQMR 268
A++ + E+K + II+ I+D+ ++ V K+++ +A+ ++I+KNE +E A R
Sbjct: 289 AERAAHLESK--FNSEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYER 345
>AL592153-1|CAI95316.1| 1326|Homo sapiens chromosome 9 open reading
frame 93 protein.
Length = 1326
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 441 ADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEI-PIERAQMR 268
A++ + E+K + II+ I+D+ ++ V K+++ +A+ ++I+KNE +E A R
Sbjct: 289 AERAAHLESK--FNSEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYER 345
>AL359877-3|CAI94977.1| 1326|Homo sapiens chromosome 9 open reading
frame 93 protein.
Length = 1326
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 441 ADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEI-PIERAQMR 268
A++ + E+K + II+ I+D+ ++ V K+++ +A+ ++I+KNE +E A R
Sbjct: 289 AERAAHLESK--FNSEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYER 345
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,933,103
Number of Sequences: 237096
Number of extensions: 1033577
Number of successful extensions: 2552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2548
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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