Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9l24
         (492 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094666-1|AAM11019.1|  252|Drosophila melanogaster GH01786p pro...   141   4e-34
AE014296-1154|AAF50645.1|  252|Drosophila melanogaster CG8549-PA...   141   4e-34

>AY094666-1|AAM11019.1|  252|Drosophila melanogaster GH01786p
           protein.
          Length = 252

 Score =  141 bits (342), Expect = 4e-34
 Identities = 63/126 (50%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
 Frame = -1

Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
           S +D+    I  +VA  CVNPET+RPYP SIIEK++KD HFSV +N++ KQ  L+ I+IL
Sbjct: 103 SCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVKMNRNTKQNTLEAIKIL 162

Query: 303 KNEIPIERAQMRVRILLTGKD-ARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRS 127
           K+ +PIER++M++R+   GK+   K K+ VVKLA  VE E W+  T ++  LIDPG +R 
Sbjct: 163 KDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAVEHEEWDEATLHLTLLIDPGQYRV 222

Query: 126 LDEMIR 109
           +DE++R
Sbjct: 223 IDELVR 228


>AE014296-1154|AAF50645.1|  252|Drosophila melanogaster CG8549-PA
           protein.
          Length = 252

 Score =  141 bits (342), Expect = 4e-34
 Identities = 63/126 (50%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
 Frame = -1

Query: 483 SQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQIL 304
           S +D+    I  +VA  CVNPET+RPYP SIIEK++KD HFSV +N++ KQ  L+ I+IL
Sbjct: 103 SCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVKMNRNTKQNTLEAIKIL 162

Query: 303 KNEIPIERAQMRVRILLTGKD-ARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRS 127
           K+ +PIER++M++R+   GK+   K K+ VVKLA  VE E W+  T ++  LIDPG +R 
Sbjct: 163 KDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAVEHEEWDEATLHLTLLIDPGQYRV 222

Query: 126 LDEMIR 109
           +DE++R
Sbjct: 223 IDELVR 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,134,847
Number of Sequences: 53049
Number of extensions: 316635
Number of successful extensions: 761
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)