Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9l03
(328 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 0.94
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 1.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 2.2
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 21 5.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 6.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 6.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 6.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 6.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 6.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 6.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 6.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 6.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 6.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 6.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 6.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 6.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 6.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 6.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 6.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 6.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 6.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 6.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 20 8.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 8.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 8.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 8.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 8.8
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 0.94
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 119 SPSNVFVFRFNLSEGYVFFC 60
+PSN+FV +S+ + FC
Sbjct: 51 TPSNLFVINLAISDFLMMFC 70
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 1.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 119 SPSNVFVFRFNLSEGYVFFC 60
+PSN+FV +S + FC
Sbjct: 85 TPSNLFVINLAISNFLMMFC 104
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 2.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 262 IHDICNKIIKYFAISKLQCVTL 197
+H+IC+++ + IS + CV L
Sbjct: 1 MHNICSRLGRILLISAVFCVGL 22
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 103 SFFVLTYLKVMFFFVFKTAGLDARCNQ 23
+FF L+ + + +FV T + C +
Sbjct: 8 TFFFLSVILITSYFVTPTMSIKCNCKR 34
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 250
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 250
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 250
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 250
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 261
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEK 250
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 228 GFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 266
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEK 261
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.8 bits (39), Expect = 8.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 152 QKK*HGILDNTSPSNV 105
Q+ HG+ N+SPS+V
Sbjct: 807 QQSHHGLHINSSPSSV 822
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 212 GFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEK 250
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.8 bits (39), Expect = 8.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYKEKDRRYEKLHNEKEK 261
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.8 bits (39), Expect = 8.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEK 261
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.8 bits (39), Expect = 8.8
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 5 GYVHTALIATRVEACRLENKKKHNLQIS*NEKRKRWKEK 121
G+ HT+ +R +C + +++ + EK KEK
Sbjct: 223 GFQHTSSRYSRERSCSRDRNREYREKDRRYEKLHNEKEK 261
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,440
Number of Sequences: 438
Number of extensions: 1460
Number of successful extensions: 28
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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