Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9k24
         (280 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4B3K7 Cluster: Sensor protein; n=1; Alteromonas macleo...    31   3.8  
UniRef50_Q7UGF6 Cluster: Similar to S-layer related protein; n=1...    31   5.0  
UniRef50_Q7RQG0 Cluster: Plasmodium falciparum CG7; n=1; Plasmod...    31   5.0  
UniRef50_Q556J9 Cluster: Putative uncharacterized protein; n=2; ...    31   5.0  
UniRef50_A0D137 Cluster: Chromosome undetermined scaffold_335, w...    31   5.0  
UniRef50_UPI0000E11707 Cluster: hypothetical protein OM2255_1752...    31   6.6  
UniRef50_Q8IBT0 Cluster: Putative uncharacterized protein MAL7P1...    31   6.6  
UniRef50_Q4Z2X3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_Q4CTT7 Cluster: Ubiquitin hydrolase, putative; n=2; Try...    30   8.7  

>UniRef50_A4B3K7 Cluster: Sensor protein; n=1; Alteromonas macleodii
           'Deep ecotype'|Rep: Sensor protein - Alteromonas
           macleodii 'Deep ecotype'
          Length = 962

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 45  LSLMKQENDTRRRS-EKTFTSISAACEIMTSILRYVQCGADYLEKI*RAITHKQTGD*DK 221
           L+L  Q+ND R++  EK   S +A  E+M SIL + +  A+ ++ +    T  +T   DK
Sbjct: 295 LALETQDNDQRQQYLEKVQKSSNALLELMNSILDFSKVEANKIDILDEPFTLTKT--IDK 352

Query: 222 KCTVFKCK*NKSQI 263
              VF+ K  + Q+
Sbjct: 353 LAQVFQVKAQQKQL 366


>UniRef50_Q7UGF6 Cluster: Similar to S-layer related protein; n=1;
           Pirellula sp.|Rep: Similar to S-layer related protein -
           Rhodopirellula baltica
          Length = 834

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 191 NGSLNFFQIICTTLNITQN*CHYFTGCTYGCKRLLRPP 78
           NG+ NFF +  T  ++T++ C  F G + GC +    P
Sbjct: 456 NGATNFFAVNQTPEDMTESACQSFLGLSIGCAKCHNHP 493


>UniRef50_Q7RQG0 Cluster: Plasmodium falciparum CG7; n=1; Plasmodium
           yoelii yoelii|Rep: Plasmodium falciparum CG7 -
           Plasmodium yoelii yoelii
          Length = 329

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 172 KKFKEPLPTNKLVIKTKNVQFLNVNKIRAKLQKKK 276
           KK KE L ++  +I+ KNV+  N+NK   K  +KK
Sbjct: 211 KKLKEELNSSLKIIEEKNVEIENINKNNLKELEKK 245


>UniRef50_Q556J9 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 325

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -3

Query: 278 FFFFCNLALILFTFKNCTFFVLITSLFVGNGSLNFFQI 165
           FFFF N    LFTF    FF+L     + N  L    I
Sbjct: 278 FFFFSNFFFFLFTFHRVVFFLLFFYFLILNNFLGITPI 315


>UniRef50_A0D137 Cluster: Chromosome undetermined scaffold_335,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_335,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1992

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +2

Query: 5   YWLIDLLAWLVCDFELDETRKRHEKEVGEDVYIHKCSL*NNDINFALCSVWCRLFGKNLK 184
           Y+ ID+L W +  +  DE  K  +K + +   IH   + N+++ +    +W ++ GK L+
Sbjct: 243 YFQIDMLQWEIISYFKDEKLKNIDKILLQVEEIHNIVIKNSNL-WKYHYLWVQMIGKILQ 301

Query: 185 SHYPQTNW*LRQKMYSF 235
            +   T   L Q + SF
Sbjct: 302 YNPLLTKQKLSQLINSF 318


>UniRef50_UPI0000E11707 Cluster: hypothetical protein OM2255_17525;
           n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
           protein OM2255_17525 - alpha proteobacterium HTCC2255
          Length = 184

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 30  GWFVILSLMKQENDTRRRSEKTFTSISAACEIMTSILRYVQCGADYLEKI*RAITH 197
           G  VI +         RR+E+   S++   E+  ++L+Y+   +D+L  + RAI H
Sbjct: 117 GGHVIAAQTHVARTVARRAERELVSLNKQHELADNVLQYINRLSDFLFVLARAINH 172


>UniRef50_Q8IBT0 Cluster: Putative uncharacterized protein
           MAL7P1.82; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.82 - Plasmodium
           falciparum (isolate 3D7)
          Length = 317

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -3

Query: 278 FFFFCNLALILFTFKNCTFFVLITSLFVGN 189
           FFFF  L  IL  F  C FF LI  L+VG+
Sbjct: 113 FFFFLKLYKILIFFSLCNFF-LINLLYVGH 141


>UniRef50_Q4Z2X3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 74

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 275 FFFCNLALILFTFKNCTFFVLITSLFVGN-GSLNFFQIICTTLNITQN 135
           FFFC     LF F    FFV     F G+   L++F  IC  + I  N
Sbjct: 2   FFFCFFCFFLFLFLFLFFFVF---FFDGHRKKLSYFNYICIPIKIVSN 46


>UniRef50_Q4CTT7 Cluster: Ubiquitin hydrolase, putative; n=2;
           Trypanosoma cruzi|Rep: Ubiquitin hydrolase, putative -
           Trypanosoma cruzi
          Length = 1515

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +2

Query: 32  LVCDFELDETRKRHEKEVGEDVYIHKCSL*NNDINFALCSVWCRLFGKNLKSHY 193
           L+C+    ET  R E+E  E+    + S    D+ FA+ S W RLFG+     Y
Sbjct: 544 LICNSVTVETAAREEEEEEEEDEGERSSTELADL-FAVPSSWLRLFGRGFLPSY 596


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,514,131
Number of Sequences: 1657284
Number of extensions: 5017100
Number of successful extensions: 13843
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13841
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)