Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9k24
         (280 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104913-1|AAI04914.1|  547|Homo sapiens solute carrier family 3...    27   8.0  
BC101827-1|AAI01828.1|  547|Homo sapiens solute carrier family 3...    27   8.0  
BC069819-1|AAH69819.1|  547|Homo sapiens solute carrier family 3...    27   8.0  
AF305814-1|AAK43528.1|  547|Homo sapiens amino acid transporter ...    27   8.0  
AF193836-1|AAK71508.1|  547|Homo sapiens amino acid transporter ...    27   8.0  
AB055003-1|BAB84090.1|  547|Homo sapiens system A amino acid tra...    27   8.0  

>BC104913-1|AAI04914.1|  547|Homo sapiens solute carrier family 38,
           member 4 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


>BC101827-1|AAI01828.1|  547|Homo sapiens solute carrier family 38,
           member 4 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


>BC069819-1|AAH69819.1|  547|Homo sapiens solute carrier family 38,
           member 4 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


>AF305814-1|AAK43528.1|  547|Homo sapiens amino acid transporter
           system A3 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


>AF193836-1|AAK71508.1|  547|Homo sapiens amino acid transporter
           hNAT3 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


>AB055003-1|BAB84090.1|  547|Homo sapiens system A amino acid
           transporter 3 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 CVMFSVVQIIWKKFKEPLPTNKLVIKTKNVQFLN 240
           C++F V  +I+KKF+ P P   L     N+ F N
Sbjct: 232 CMVFFVSVVIYKKFQIPCPLPVLDHSVGNLSFNN 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,441,123
Number of Sequences: 237096
Number of extensions: 803348
Number of successful extensions: 1400
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)