Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9k21
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559... 185 3e-47
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765... 161 5e-40
10_08_0366 - 17232010-17232061,17232546-17232601,17232692-172327... 113 1e-25
03_05_0445 - 24401899-24401992,24402098-24402162,24402262-244022... 58 6e-17
03_01_0057 + 476172-476283,476337-476449,476532-476634,477089-47... 79 3e-15
07_03_0370 - 17366063-17366197,17367445-17367483,17367930-173680... 72 5e-13
06_03_0904 + 25832026-25832643 58 7e-09
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 37 0.013
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 36 0.023
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 35 0.070
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 31 1.1
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 30 1.5
08_02_1525 + 27661094-27661801 29 2.6
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 29 4.6
06_02_0030 - 10764829-10764875,10764983-10765045,10765242-107653... 29 4.6
03_05_0538 + 25368590-25368868 29 4.6
03_05_0290 - 22791338-22791925,22792012-22793196,22793835-227939... 29 4.6
07_01_0434 - 3302926-3303072,3303402-3303545,3303644-3304293,330... 28 6.1
10_08_0409 - 17710118-17710624,17711003-17711701,17711828-17712121 28 8.1
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 8.1
05_01_0115 + 804674-804766,805729-806442 28 8.1
>11_08_0073 -
28155156-28155296,28155422-28155682,28155858-28155962,
28156563-28156693,28156905-28156941
Length = 224
Score = 185 bits (450), Expect = 3e-47
Identities = 84/151 (55%), Positives = 121/151 (80%)
Frame = +1
Query: 238 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVK 417
M ++FG + TP E+LR+N+R L+K++R+++RER ++ QEKK+IA+IKK+AK+GQM AVK
Sbjct: 1 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIAEIKKVAKQGQMGAVK 60
Query: 418 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMP 597
IMAKDL+RTR + KF +K+ +Q VSL+IQTLKS M +AMKGVT+AM MNRQ+N+P
Sbjct: 61 IMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMRQMNRQMNLP 120
Query: 598 QIXKILQEFEKQSEIMDMKEEMMNDSIDEAM 690
+ KI++EFE Q+E M++ MND+ID+A+
Sbjct: 121 ALQKIMREFEIQNEKMEIVSSTMNDAIDDAL 151
>07_01_0908 +
7653813-7653849,7655220-7655350,7655946-7656020,
7657007-7657111,7657648-7657911,7658474-7658614
Length = 250
Score = 161 bits (391), Expect = 5e-40
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 25/176 (14%)
Frame = +1
Query: 238 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMD--- 408
M +LFG + TP E+LR+N+R L++++R+++RER ++ QEKK+I +IKK AKEGQM
Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMKLDN 60
Query: 409 ----------------------AVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKS 522
AVK+MAKDL+RTR + KF +K+ +Q VSL++QTLKS
Sbjct: 61 LPMKWWKVVDEQFHFAAKNGQGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKS 120
Query: 523 QSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDSIDEAM 690
M AMKGVT+AM MNRQLN+P + +I+ EFE+Q+E M+M E+M D+ID+A+
Sbjct: 121 TQAMGDAMKGVTKAMGQMNRQLNLPGLQRIMMEFERQNERMEMTSEVMGDAIDDAL 176
>10_08_0366 -
17232010-17232061,17232546-17232601,17232692-17232727,
17232861-17232941,17233060-17233131,17233394-17233465,
17233555-17233659,17233754-17233804,17234075-17234109,
17234692-17234736,17234940-17234973
Length = 212
Score = 113 bits (272), Expect = 1e-25
Identities = 51/147 (34%), Positives = 93/147 (63%)
Frame = +1
Query: 250 FGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 429
F K TP E +R ++R L A R ++R+ ++ +EK+++A+IK+ AK G A +I+A+
Sbjct: 4 FAKKPTPREAIRSSKRELTNATRGIERDIGTLQLEEKRLVAEIKRTAKTGNEAATRILAR 63
Query: 430 DLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXK 609
L+R R+ + +A I+ ++ Q + + +++A M+ ++AM +N+Q++ + K
Sbjct: 64 QLIRLRQQISNLQGSRAQIRGIATHTQAMHANTSVAAGMQSASKAMGALNKQMDPAKQMK 123
Query: 610 ILQEFEKQSEIMDMKEEMMNDSIDEAM 690
++QEF+KQS MDM EMM+DSID +
Sbjct: 124 VMQEFQKQSAQMDMTNEMMSDSIDNIL 150
>03_05_0445 -
24401899-24401992,24402098-24402162,24402262-24402297,
24402419-24402499,24403084-24403155,24403265-24403336,
24403628-24403678,24404374-24404408,24404615-24404659,
24405067-24405100
Length = 194
Score = 58.0 bits (134), Expect(2) = 6e-17
Identities = 24/61 (39%), Positives = 44/61 (72%)
Frame = +1
Query: 508 QTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDSIDEA 687
+ + + ++++ MKG ++AMA MN+Q+ + K+++EF+KQS +DM EMM+D+IDE
Sbjct: 55 EAMYAGTSISAGMKGASKAMAAMNKQMEPTKQIKVMREFQKQSNQLDMTLEMMSDAIDET 114
Query: 688 M 690
+
Sbjct: 115 L 115
Score = 47.2 bits (107), Expect(2) = 6e-17
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 247 LFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 399
+F K+ P E LR ++R ++ A R ++RE ++ +EKK++A+IKK AK G
Sbjct: 3 IFKKKVDPKEALRTSKREMSVATRGVEREIGSLQMEEKKLVAEIKKTAKTG 53
>03_01_0057 +
476172-476283,476337-476449,476532-476634,477089-477210,
477303-477497,477627-477701,478082-478179,478328-478421
Length = 303
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Frame = +1
Query: 259 KMTPDEMLRKNQRALNKAMRDLDRERMKM------------EQQEKKVIADIKKLAKEGQ 402
K TP + LR+ QR L R++DR+ M +++EKKV I++ AK
Sbjct: 11 KPTPQQQLREWQRRLRNEGRNIDRQIRAMMLMVESGASADVQREEKKVEKSIREAAKRND 70
Query: 403 MDAVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNR 582
+ + K +AK++VR+R+ V + KA + ++S+ + + + + + T M +N
Sbjct: 71 IGSAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATARTVGHLSKSTEVMKLVNN 130
Query: 583 QLNMPQIXKILQEFEKQSEIMDMKEEMMNDSIDEAM 690
+ P++ +QEF K+ + EEM+ND++D A+
Sbjct: 131 LMKAPEVAATMQEFSKEMTKAGVMEEMVNDAVDSAL 166
>07_03_0370 -
17366063-17366197,17367445-17367483,17367930-17368001,
17368287-17368478,17368660-17368781,17369394-17369496,
17370786-17370836,17371199-17371275,17371646-17371757
Length = 300
Score = 71.7 bits (168), Expect = 5e-13
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Frame = +1
Query: 265 TPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIM------- 423
TP + LR+ QR L R LDR+ ++++EK V I++ AK + + K++
Sbjct: 13 TPQQQLREWQRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIGSAKLLSNYEQRT 72
Query: 424 ----------AKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMAT 573
AK+LVR+RR V + KA + +VS+ + + + + + M
Sbjct: 73 LLVLYPTMALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEVMKI 132
Query: 574 MNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDSIDEAM 690
+N + P++ +QEF K+ + EEM+ND++D A+
Sbjct: 133 VNNLMKAPELAATMQEFSKEMTKAGVMEEMVNDAVDSAL 171
>06_03_0904 + 25832026-25832643
Length = 205
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/121 (21%), Positives = 64/121 (52%)
Frame = +1
Query: 316 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 495
+ L R+ K E++EK+ +KK ++G MD +I A++ +R R ++ + + + AV
Sbjct: 19 KSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMNYLRLASRLDAV 78
Query: 496 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDS 675
++ T + ++M + +++ + N+ ++ + + FE+Q M+++ E M +
Sbjct: 79 VARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDNFERQFVNMEVQAEFMEGA 138
Query: 676 I 678
+
Sbjct: 139 M 139
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Frame = +1
Query: 238 MEWLFGHKMT--PDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDA 411
M+ +FG K + P ++ +NK +D + K++++ + I+K DA
Sbjct: 1 MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGRYKEQIRKTRPGPSQDA 60
Query: 412 VKIMAKDLVRTRRYV--RKFMLMKA--NIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMN 579
+K A L++ +R ++ ML N+ V+ LK AMK + + M
Sbjct: 61 IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMM 120
Query: 580 RQLNMPQIXKILQEFEKQSEIMDMKEEM 663
+ + + I + E +++MD+ E+
Sbjct: 121 KTVKIEDIDNMQDE---MTDLMDVSNEI 145
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 253 GHKMTPDEML----RKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQM-DAVK 417
G K +E+L ++ + AL +A +RER + E+ EKK+ + KK A+E QM +A++
Sbjct: 88 GRKRIHEEVLVQIEKEKEAALVEAQHKAERERKEREELEKKLEEERKK-AEEAQMKEAME 146
Query: 418 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNM 594
K+L RY L K +A+ K + Q + G ++ ++ L M
Sbjct: 147 QQQKEL---ERYQELERLQKEREEAMKRKQMEEEQQKQSQMKLLGKNKSRPKLSFALGM 202
>08_02_1091 + 24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +1
Query: 274 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
E ++N+R + KA +L+RER+K E+++K +K++ ++ + DA K +D R +
Sbjct: 1046 EQKKQNEREMRKAAAELERERVKQEREQK-----LKQMEQKKKTDARKRQWEDDGRKEKE 1100
Query: 454 VRK 462
+K
Sbjct: 1101 KKK 1103
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 274 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKK 384
E ++N+R + KA L+RER+K E++ K+ + KK
Sbjct: 1339 EEKKQNEREMRKAAAKLERERLKQEKELKQKQEEQKK 1375
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/140 (17%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +1
Query: 271 DEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRR 450
++ + K L+ ++ + + K+E++EKK+ +K++ ++ K++ V+
Sbjct: 279 EDDINKRLAELHLQEKEAESKNRKLEEREKKIAEREEKVSAREKVGLQKLLEDHNVKLES 338
Query: 451 YVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLN-MPQIXKILQEFE 627
R F L N + S ++ ++ + Q K V + ++++ + + K L+E++
Sbjct: 339 KRRDFDLQLEN-EKKSFDAMLVQKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQ 397
Query: 628 -----KQSEIMDMKEEMMND 672
K + + +E + ND
Sbjct: 398 NDLDTKSNALKKWEESLQND 417
>08_02_1525 + 27661094-27661801
Length = 235
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/106 (18%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +1
Query: 358 KKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMA 537
K +I D++ ++G AV+ + +R + +K K ++ V + K ++
Sbjct: 98 KAIIQDLQVSLRKGDNAAVQTKIQSYIRLVKKAKKHS--KKTVKKVVSDKEECKIVKLLS 155
Query: 538 QAMKGVTRAMAT----MNRQLNMPQIXKILQEFEKQSEIMDMKEEM 663
+A + T + +++Q+ MP++ I + F+K++ ++ +E++
Sbjct: 156 EAREITTSLFESTIHLLSKQIAMPKLSLISKAFQKKNSVICNEEQL 201
>11_06_0760 +
27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 307 KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRR 450
K +++ E + E+K I D ++ +EGQ + KD+VR RR
Sbjct: 473 KLFNEVESESRISKDGERKEIDDGEQKEREGQQKEIDGEQKDIVRPRR 520
>06_02_0030 -
10764829-10764875,10764983-10765045,10765242-10765331,
10765510-10765534
Length = 74
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 396 RTNGCC*NYGKRLSTYQTICPQVHANESEHPSGVTEDTNSQVSKH 530
+ C + K S YQ I + G ED+NS+V+KH
Sbjct: 11 KEKNCISSKKKNSSNYQNIVEDKQLQSTGFKDGNNEDSNSRVTKH 55
>03_05_0538 + 25368590-25368868
Length = 92
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 465 HANESEHPSGVTEDTNSQVSKHHGAGDEGSHSCHGYHEQTTKHATD 602
H + EH GV E +++ HG G E ++ KH +
Sbjct: 32 HKKDGEHKEGVVEKIKDKITGDHGDGGEHKEKKDKKKKKEKKHGEE 77
>03_05_0290 -
22791338-22791925,22792012-22793196,22793835-22793904,
22795918-22795979
Length = 634
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1
Query: 199 GYI-QIVRSTH*VMMEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIA- 372
GY+ +I + T+ + +++ +M P RKN L +A+ +E + + EKK +
Sbjct: 396 GYLAEIAKDTNLPLSKFIAIAEMVPPAS-RKNHDGLYRAIDMYLKEHPSLSKSEKKALCR 454
Query: 373 --DIKKLAKEGQMDAVK 417
D KKL+++ + AV+
Sbjct: 455 LMDCKKLSQDACLHAVQ 471
>07_01_0434 -
3302926-3303072,3303402-3303545,3303644-3304293,
3304410-3304493,3304651-3304703,3305127-3305197,
3305285-3305362,3305775-3305903,3305988-3306044,
3306693-3306923,3307748-3307882,3308609-3308684,
3308768-3309024,3309095-3309202,3309328-3309526,
3309600-3309604
Length = 807
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 268 PDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 399
PDEML ++ N ++ +++ EQQ VI+ K L ++G
Sbjct: 295 PDEMLDMAEKLANANPEEVAAMKVQAEQQMSYVISGAKMLKQQG 338
>10_08_0409 - 17710118-17710624,17711003-17711701,17711828-17712121
Length = 499
Score = 27.9 bits (59), Expect = 8.1
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Frame = +1
Query: 283 RKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG--QMDAVKIMAKDLVRTRRYV 456
+ Q A NKA D+ ERMK E K+ +EG + +A K+ A+ V + R
Sbjct: 189 KTQQEAANKAKVDVAEERMKGEVGAKE---------REGLTRQNAAKVDAETKVVSVRQQ 239
Query: 457 RKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKI----LQEF 624
+ +A ++A +++ + ++ +A A G+ A +Q + Q+ + ++E
Sbjct: 240 GIGLREEAKVKA-EVQVYENEREAEIAAAQAGLAMKKAGWEKQSKVAQVEAVKAVAIREA 298
Query: 625 EKQSEI 642
E Q E+
Sbjct: 299 ELQMEV 304
>09_06_0107 + 20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 27.9 bits (59), Expect = 8.1
Identities = 29/147 (19%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Frame = +1
Query: 241 EWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKI 420
EW PD++ + + L + + ++ + ++Q+K+ + K+L K+ + + +
Sbjct: 569 EWQLAIDRIPDKVASEGIKTLLTVIHAVVVQQAEEQKQKKRSESAFKELEKKAE-ELRSL 627
Query: 421 MAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLK----SQSTMAQAMKGVTRAMATMNRQL 588
+K + M K+ + K++ L+ + + + GVTRAM N Q
Sbjct: 628 ESKYGPYSGAEGYGDMSRKSPVSDKRAKVEALRCRADEEKSKYEKSIGVTRAMTLNNLQT 687
Query: 589 NMPQIXKILQEFEKQSEIMDMKEEMMN 669
P + + + F S M+ E + N
Sbjct: 688 GFPNVFQAMTGF--ASVCMEAFESVYN 712
>05_01_0115 + 804674-804766,805729-806442
Length = 268
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 244 WLFGHKMTPDEMLRKNQRALNKAMRDLD--RERMKMEQQEKKVIAD-IKKLAKE 396
W F + P E + + +++L +LD +E +K ++Q +AD ++ +AKE
Sbjct: 21 WAFQDDLQPQESMEELKQSLMATTLELDAAKEELKKKEQSIAKLADLVRHVAKE 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,496,729
Number of Sequences: 37544
Number of extensions: 281446
Number of successful extensions: 771
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -