Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9k21
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 239 1e-63
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 102 3e-22
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical pr... 35 0.048
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.048
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.048
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.59
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 31 0.59
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 30 1.8
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 30 1.8
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 2.4
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.2
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.2
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.2
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 29 4.2
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 29 4.2
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 29 4.2
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 5.5
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 5.5
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 5.5
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 5.5
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 5.5
U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 28 7.3
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 7.3
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.6
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 239 bits (585), Expect = 1e-63
Identities = 112/151 (74%), Positives = 137/151 (90%)
Frame = +1
Query: 238 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVK 417
M++LFG + TP E+LR+NQRALNKA+R+LDRER +ME QEKKVIADIK +AK+ QMD+VK
Sbjct: 1 MDFLFGRRKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVK 60
Query: 418 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMP 597
+MAKDLVRTRRY++KF++MKANIQAVSLK+QTLKSQ MA AMKGVT+AM +MNRQLN+P
Sbjct: 61 VMAKDLVRTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLP 120
Query: 598 QIXKILQEFEKQSEIMDMKEEMMNDSIDEAM 690
QI KI+ EFEKQSEIMDMKEE+M D+ID+A+
Sbjct: 121 QIQKIMMEFEKQSEIMDMKEEVMGDAIDDAL 151
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 102 bits (244), Expect = 3e-22
Identities = 52/144 (36%), Positives = 84/144 (58%)
Frame = +1
Query: 259 KMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLV 438
K P E+ R N+R L K RDL+ +R +M+++EK++ +IKKLA +G DA + +AK LV
Sbjct: 6 KPDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARHLAKQLV 65
Query: 439 RTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQ 618
+ R K + M A I V + ++S + M AM + M MN Q+ + ++ ++
Sbjct: 66 QLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEKVAANMR 125
Query: 619 EFEKQSEIMDMKEEMMNDSIDEAM 690
EF+ E M + EEMMND++D +
Sbjct: 126 EFQMAQEKMGLTEEMMNDTLDSIL 149
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/145 (31%), Positives = 88/145 (60%)
Frame = +1
Query: 247 LFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMA 426
LFG K P E +R+ QR + + MR LDR+ ++++E+KV +IK+ AK+G D I+A
Sbjct: 3 LFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLILA 62
Query: 427 KDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIX 606
K ++++R+ + K + KA I +V + +Q + MA +++ T M +M + + +P+I
Sbjct: 63 KSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPEIM 122
Query: 607 KILQEFEKQSEIMDMKEEMMNDSID 681
K ++E + + + EEM+ ++++
Sbjct: 123 KTMREMSAEMMKLGIIEEMIEETLE 147
>AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical
protein F23C8.6 protein.
Length = 205
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/134 (23%), Positives = 71/134 (52%)
Frame = +1
Query: 280 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVR 459
L K+ L A + L++ + E+ EK + K+G + ++ A++ +R +
Sbjct: 10 LEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAV 69
Query: 460 KFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSE 639
++ M A I AV+ ++QT +Q + +M GV +AM + + +N+ ++ +++ FE+ E
Sbjct: 70 NYIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFE 129
Query: 640 IMDMKEEMMNDSID 681
+D+ + M ++D
Sbjct: 130 DLDVTTKTMEKTMD 143
>Z68338-2|CAA92759.1| 411|Caenorhabditis elegans Hypothetical
protein T24B8.2 protein.
Length = 411
Score = 35.1 bits (77), Expect = 0.048
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +1
Query: 301 LNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKA 480
+ KAM LDRE ++EQ+ KK + + G + + R + + +
Sbjct: 221 IRKAMNKLDREIQQLEQKVKKYDEQCRACLRTGDKGRAQNFLRQRKRAEKDIADKDVQYQ 280
Query: 481 NIQAVSLKIQTLKSQSTMAQAMKGVTRAM-ATMNRQLNMPQIXKILQEFEKQSEIMDMKE 657
+ + +I + K+ + QA K T A AT+ RQ P KI + + MD +
Sbjct: 281 KLLTMLHQISSAKNNKDVLQAYKSGTAAFKATLARQGLSPD--KIHETMDDVVNSMDEYK 338
Query: 658 EM 663
E+
Sbjct: 339 EI 340
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/123 (19%), Positives = 56/123 (45%)
Frame = +1
Query: 316 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 495
+ LDRE+ + ++ ++ + I KLA G D + + D+ +R + + +N +A
Sbjct: 23 KQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKI-ASNAEAA 81
Query: 496 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDS 675
LK + K+++ + ++K M +++ Q ++ QS ++ + D
Sbjct: 82 RLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDK 141
Query: 676 IDE 684
+ E
Sbjct: 142 LSE 144
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/123 (19%), Positives = 56/123 (45%)
Frame = +1
Query: 316 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 495
+ LDRE+ + ++ ++ + I KLA G D + + D+ +R + + +N +A
Sbjct: 23 KQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKI-ASNAEAA 81
Query: 496 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMKEEMMNDS 675
LK + K+++ + ++K M +++ Q ++ QS ++ + D
Sbjct: 82 RLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDK 141
Query: 676 IDE 684
+ E
Sbjct: 142 LSE 144
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 262 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 375
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 262 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 375
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 262 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 375
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 262 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 375
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -1
Query: 602 ICGMFSCLFMVAMARVTPFIACAMVL*DLRVCIFSDTAWMF-AFISMNLRTYRLVRTKSF 426
+CG FS ++M+ +A I C+++ ++ AW+F A + + + TK+
Sbjct: 242 VCGSFSIMYMIPVAVWWGTIMCSLI-------VYLSFAWLFGATCNFAMFAAAAIFTKAI 294
Query: 425 AIILTASIC 399
A ++ +C
Sbjct: 295 ATVIQGIVC 303
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 280 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 429
L+ R ++ + L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 280 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 429
L+ R ++ + L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 280 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 429
L+ R ++ + L++ER E+Q KK+ D+ + A+E + A K+ AK
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDL-QAAEEQNLAANKLKAK 1042
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/129 (19%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +1
Query: 280 LRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYV- 456
+RK LN A D++ MK+E KK + + + + + K +AK + ++R++
Sbjct: 11 IRKQLENLNNATDDINSYEMKLE-TVKKQFCETQLMFNKEMLGIPKKLAKHISKSRQFFD 69
Query: 457 --RKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEK 630
+ ++ +Q + + + K+ MA+ + N++L+ + + + E+
Sbjct: 70 LKSRESEIRRCVQQAAAQFERQKTSVEMAREQVQILHNSLNNNQELDAEK--QYVDVIEQ 127
Query: 631 QSEIMDMKE 657
Q E++ E
Sbjct: 128 QLELVKEAE 136
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +1
Query: 259 KMTPDEMLR-----KNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE--GQMDAVK 417
K T DEM+ KN++++ + ++ ++ E EK+ + ++KK KE ++ A K
Sbjct: 452 KYTRDEMMAMRSDTKNEQSVEEISAKIENLSVETETDEKENVVEVKKTFKERLAELKAAK 511
Query: 418 IMAK 429
AK
Sbjct: 512 AAAK 515
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +1
Query: 259 KMTPDEMLR-----KNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE--GQMDAVK 417
K T DEM+ KN++++ + ++ ++ E EK+ + ++KK KE ++ A K
Sbjct: 452 KYTRDEMMAMRSDTKNEQSVEEISAKIENLSVETETDEKENVVEVKKTFKERLAELKAAK 511
Query: 418 IMAK 429
AK
Sbjct: 512 AAAK 515
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 477 SEHPSGVTEDTNSQVSKHHGAGDEGSHSCHGYHEQTTKHATDTKDITG 620
S SGV+ D+ HHG G SH HG H T + + D +G
Sbjct: 37 SSSDSGVSADSIDH--HHHGHGHGHSHGGHG-HSHTHNNDDSSSDCSG 81
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 256 HKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAK--EGQMDAVKIMAK 429
H++ + M +N+ L KA + ++ R K+E+ EKK+I + L + E Q +++ K
Sbjct: 405 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEKVEEQAKLLEVNNK 462
Query: 430 DLVRTR 447
+L +++
Sbjct: 463 ELEQSK 468
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 423 GKRLSTYQTICPQVHANESEHPSGVTEDTNSQVSKHHGAGDEGSHSCHGYHE-QTTKHAT 599
G++ ST Q I P N H + TE+ +++H D H YH+ T H T
Sbjct: 364 GRQEST-QLISPSTSTNSLTHLNDKTEEDVDHNAEYHDYTDHHYDEDHEYHDSDNTTHPT 422
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 256 HKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAK--EGQMDAVKIMAK 429
H++ + M +N+ L KA + ++ R K+E+ EKK+I + L + E Q +++ K
Sbjct: 407 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEKVEEQAKLLEVNNK 464
Query: 430 DLVRTR 447
+L +++
Sbjct: 465 ELEQSK 470
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/122 (19%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Frame = +1
Query: 313 MRDLDRERMKMEQQEKKVIADIKKLAKEGQM------DAVKIMAKDLVRTRRYVRKFMLM 474
+ L++ ++ + +EK+ + +KK+ +E QM + ++++ K + K +
Sbjct: 995 LTSLEQTQITLTPEEKQELQILKKIVEEIQMWQEETIEIIQLVDKTPKTVQESETKIKKV 1054
Query: 475 KANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFEKQSEIMDMK 654
Q V + + L+ S + TM +Q + Q+ K L E I+ K
Sbjct: 1055 NEIQQTVVAQTRRLEDASRFRKDETFTKTVQETMTKQQQVQQLVKELHERAASQNIVVRK 1114
Query: 655 EE 660
+E
Sbjct: 1115 QE 1116
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +1
Query: 283 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 454 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIXKI-LQEF 624
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 625 -EKQSEIMDMKEEMMND 672
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +1
Query: 283 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 454 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIXKI-LQEF 624
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 625 -EKQSEIMDMKEEMMND 672
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +1
Query: 283 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 454 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIXKI-LQEF 624
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 625 -EKQSEIMDMKEEMMND 672
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/137 (16%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +1
Query: 283 RKNQRALN---KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
RKN+R + ++ +R ++E +EK+ + + EG++ KI+ DL+
Sbjct: 581 RKNERQIQIRQQSSGPTNRRETEIEYEEKRQGPPVVRTTVEGKLKMEKIVGADLITVDSC 640
Query: 454 VRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATM--NRQLNMPQIXKI-LQEF 624
+ ++ + +K K + + G ++ T+ N + M + + + +F
Sbjct: 641 ISSAWTVRDTVTNYKIKSTIGKKSLILEEIKDGQSKYKITLIENGETKMEREASLDVPDF 700
Query: 625 -EKQSEIMDMKEEMMND 672
K+ + ++ +++++D
Sbjct: 701 VNKKDYLAEVSKKLLSD 717
>U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical
protein F56D2.3 protein.
Length = 412
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/51 (21%), Positives = 30/51 (58%)
Frame = +1
Query: 277 MLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 429
+++ N+ ++ + +L ++ K+E++ KK++ + K ++ Q K+M K
Sbjct: 287 IMKNNKMTVSSPVPELSKQAKKLEKEAKKIMENKKMSVEKKQEKLDKLMLK 337
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = +1
Query: 274 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 396
EML++ +++L + + E +MEQ++KK++ +++ L K+
Sbjct: 177 EMLKEQRKSLGERVE----EEKRMEQEQKKMLEELEMLLKK 213
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 271 DEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 396
D+ QRA+ + +DRE+ + E+ E K + + AKE
Sbjct: 302 DKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEEADRKAKE 343
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 253 GHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKD 432
G ++ P ML +A + M +ER+K E +E K + KK+ KEGQ D K M+
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ-DIKKFMSPA 1325
Query: 433 LVRTRR 450
+T +
Sbjct: 1326 APKTAK 1331
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 253 GHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKD 432
G ++ P ML +A + M +ER+K E +E K + KK+ KEGQ D K M+
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ-DIKKFMSPA 1325
Query: 433 LVRTRR 450
+T +
Sbjct: 1326 APKTAK 1331
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.6
Identities = 28/142 (19%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +1
Query: 277 MLRKNQRALNKAMRDLDRERMKMEQQEK-KVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 453
++ Q A K R+LD +R + E Q+K + + ++ +E + +D R+
Sbjct: 5 IILSQQIANRKTQRELDEQRKEFEHQQKLQRMQQESRIKQEEAFRQITQQNQDFELRRQ- 63
Query: 454 VRKFMLMKANIQAV--SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIXKILQEFE 627
RK +A ++ + S KI+ + A++ + + N ++ P + + ++
Sbjct: 64 -RKQNEQEARLEELRRSAKIENDRKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSL 122
Query: 628 KQSE-IMDMKEEMMNDSIDEAM 690
KQ E + K N+ +D +
Sbjct: 123 KQDEQFRNNKIRFKNEEMDRTL 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,636,555
Number of Sequences: 27780
Number of extensions: 258893
Number of successful extensions: 880
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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