Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9k18
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 282 2e-76
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 282 2e-76
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 137 9e-33
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 137 9e-33
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 130 1e-30
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 129 2e-30
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 120 1e-27
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 116 2e-26
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 113 9e-26
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 113 9e-26
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 97 9e-21
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 90 2e-18
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 84 9e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 83 3e-16
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 82 5e-16
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 77 2e-14
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 77 2e-14
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 75 5e-14
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 69 5e-12
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 9e-10
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 48 5e-06
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 43 3e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 41 8e-04
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 31 1.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 1.1
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 28 5.9
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 28 7.9
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 28 7.9
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 7.9
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 7.9
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 7.9
AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine re... 28 7.9
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 282 bits (692), Expect = 2e-76
Identities = 123/151 (81%), Positives = 143/151 (94%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 368
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 369 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 548
EEYPNKPPTV+F+SKMFHPNVYADG ICLDILQNRWSPTYDV+AILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 549 PANSMAAQLYKENRREYEKRVKACVEQSFID 641
PANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 121 PANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 282 bits (692), Expect = 2e-76
Identities = 123/151 (81%), Positives = 143/151 (94%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 368
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 369 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 548
EEYPNKPPTV+F+SKMFHPNVYADG ICLDILQNRWSPTYDV+AILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 549 PANSMAAQLYKENRREYEKRVKACVEQSFID 641
PANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 121 PANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 137 bits (331), Expect = 9e-33
Identities = 57/135 (42%), Positives = 87/135 (64%)
Frame = +3
Query: 201 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 380
A +R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 381 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 560
KPP V F ++++HPN+ ++G ICLDIL+++WSP +S +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 561 MAAQLYKENRREYEK 605
A++YK +R Y +
Sbjct: 122 EIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 137 bits (331), Expect = 9e-33
Identities = 57/135 (42%), Positives = 87/135 (64%)
Frame = +3
Query: 201 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 380
A +R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 381 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 560
KPP V F ++++HPN+ ++G ICLDIL+++WSP +S +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 561 MAAQLYKENRREYEK 605
A++YK +R Y +
Sbjct: 122 EIARIYKTDRERYNQ 136
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 130 bits (314), Expect = 1e-30
Identities = 59/136 (43%), Positives = 86/136 (63%)
Frame = +3
Query: 207 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 386
RR++++ +RL DP G+S P ++N ++ +I GP D+PF G FKL + EEYP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 387 PPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 566
P VRF++K++HPN+ G ICLDIL+++WSP + +L SIQ+LLS PNP P +
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126
Query: 567 AQLYKENRREYEKRVK 614
A+ +K N E K K
Sbjct: 127 AEQWKTNEAEAIKTAK 142
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 129 bits (312), Expect = 2e-30
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 14/162 (8%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTD-NNIMIWNAVIFGPHDTPFEDGTFKLTIEF 365
M+ A +RLM ++K L PP G+ AP D +N W +I GP +T F +G F I F
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITF 60
Query: 366 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAIL 506
++YP PP +RF +FHPN+YADG +C+ IL RWSP + IL
Sbjct: 61 PQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKIL 120
Query: 507 TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 632
S+ S+L++PN SPAN AA++++E+R ++EK + V ++
Sbjct: 121 LSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 120 bits (288), Expect = 1e-27
Identities = 60/164 (36%), Positives = 97/164 (59%), Gaps = 14/164 (8%)
Frame = +3
Query: 183 IKMSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 359
++ S+ ++ + D +R+ P G S G DN+I W ++ GP DT +E G FK +
Sbjct: 1 MEQSSLLLKKQLADMRRV---PVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAIL 57
Query: 360 EFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSA 500
+F +YP KPP ++F+S+++HPN+ +G +C+ IL + RW P + V
Sbjct: 58 DFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVET 117
Query: 501 ILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 632
IL S+ S+L+DPN SPAN AA++ +EN E++K+V CV +S
Sbjct: 118 ILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRS 161
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 116 bits (278), Expect = 2e-26
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 17/168 (10%)
Frame = +3
Query: 180 KIKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 359
K S+ A R L + K LQ P G + ++N+ +W I+GP T ++ G FK +I
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 360 EFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQN-------------RWSPTYDVSA 500
F YP PP+++F +K++HPNVY +G +C+ IL + RW+PT V
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 501 ILTSIQSLLSDPNPNSPANSMAAQLY---KENR-REYEKRVKACVEQS 632
IL S+ SLL++PN +SPAN A+ +Y KE++ EY K V VE+S
Sbjct: 124 ILLSVISLLNEPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEES 171
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 113 bits (273), Expect = 9e-26
Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKL 353
MS A RL + K ++D P G P N N+ W I G DT +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 354 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QNR-WSPTYDVSAILTSIQSLL 527
+ F +++P+ PP +F +FHPNVY G +CL +L +N+ W P+ + +L IQ LL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 528 SDPNPNSPANSMAAQLYKENRREYEKRVK 614
+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 113 bits (273), Expect = 9e-26
Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKL 353
MS A RL + K ++D P G P N N+ W I G DT +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 354 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QNR-WSPTYDVSAILTSIQSLL 527
+ F +++P+ PP +F +FHPNVY G +CL +L +N+ W P+ + +L IQ LL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 528 SDPNPNSPANSMAAQLYKENRREYEKRVK 614
+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 97.5 bits (232), Expect = 9e-21
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRL---QEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 359
MS A RL R+ K + E TG+ + N+ I GP DTP+ G F L I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 360 EFTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNRWSPTYDVSAILTSIQSLLSDP 536
+ ++YP PP V+F +K++HPNV + G ICLDIL+++W+ + + +L SIQ+L+ P
Sbjct: 61 KIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTP 120
Query: 537 NPNSPANSMAAQLYKE 584
P P +++ A+ Y E
Sbjct: 121 EPKDPQDAVVAKQYME 136
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +3
Query: 312 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 488
GP DT +E+G +++ ++ ++YP K P++ F++K+FHPN+ A G +CLD++ W+ Y
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 489 DVSAIL-TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACV 623
D++ I T + LL+ PN P N AA+LY EY + + V
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYV 146
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 84.2 bits (199), Expect = 9e-17
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Frame = +3
Query: 186 KMSTPARRRLMRDFKRL---QEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 356
KMS A R+ R K + + G+ +NN+M I GP TP+ GTF++
Sbjct: 14 KMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIK 73
Query: 357 IEFTEEYPNKPPTV---------------RFVSKMFHPNVYADGG-ICLDILQNRWSPTY 488
++ E YP +PP V +FV++++HPN+ + G ICLDIL+++W+ +
Sbjct: 74 VDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASL 133
Query: 489 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKEN 587
+ +L S+Q++L P P+ P +++ A+ + N
Sbjct: 134 TLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +3
Query: 276 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 455
+ N++ W ++ P P+ G FK+ I F +YP KPP V F +K++HPNV +G CL
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCL 87
Query: 456 DIL-QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEK 605
I+ W P ++ ++ SL+++P P+ P + A+ ++++ +++ K
Sbjct: 88 PIVTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMK 138
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 362
MS A RRLM++ +L+ + P G V T N++ W + G T + F L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFT 60
Query: 363 FTEEYPNKPPTVRFVSKMF--HPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLS 530
F +YP P V FV + HP++Y++G ICL IL + W+P V ++ SI S+LS
Sbjct: 61 FGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLS 118
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +3
Query: 192 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 371
S+ A RRL +D+ +L +DP G+ P ++NI+ W+ + G DTPF G + + F E
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 372 EYPNKPPTVRFVSKMFHPNVYADGGICLDILQ---NRWSPTYDVSAILTSIQSLLSDPNP 542
+P PP + ++ + + +CL I W+P + VSAIL + S + N
Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM---NE 131
Query: 543 NSPANSMAAQLYKENR 590
NSPA A ++ R
Sbjct: 132 NSPAAGSIAGTPQDQR 147
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 368
+ST A +RL +D++RL ++P + AP + NI+ W +I G TP+E G + + F
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFP 64
Query: 369 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQ---NRWSPTYDVSAILTSIQSLLSDPN 539
+++P KPP + ++ + + +CL I + W+P + VS I+T + S ++D
Sbjct: 65 KDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQ 122
Query: 540 P 542
P
Sbjct: 123 P 123
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 74.9 bits (176), Expect = 5e-14
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Frame = +3
Query: 303 VIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA-DGGICL-DILQNRW 476
+I G +TP+E G F+L I+ E YP K PTV+F++K++HP+V DG ICL D+ W
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVW 443
Query: 477 SPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEK 605
+ + +L IQS +S+ N P + + NR +EK
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Frame = +3
Query: 315 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL------QNRW 476
P + + G F+ I EY N PP V+ ++K++HPN+ DG ICL IL Q W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 477 SPTYDVSAILTSIQSLLSD-PNPNSPANSMAAQLYKENRREYEKRVKACVEQ 629
PT +++ ++ + SL +D + N N AAQ++ +NR + RV+ + +
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISR 178
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 294 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 470
W + GP +P+E G +++++ F ++P PP F + + HPNV G I L +L Q
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 471 RWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKA 617
WS + +L I +LL+ P+ AN A Y+ R YE + +A
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARA 178
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Frame = +3
Query: 276 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVYAD 440
+ + I +I GP DTP+ +G F+ I F YP PP F++ F+PN+Y D
Sbjct: 439 EGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYND 498
Query: 441 GGICLDIL-------QNRWSPTYDVSAILTSIQSLL 527
G ICL IL + +W+P + +L SIQ ++
Sbjct: 499 GKICLSILGTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 330 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLD-ILQNRWSPTYDVSAI 503
+++ F LT++ EYP KPP ++F ++HPNV +C +LQ W P + +
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 504 LTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKR 608
L ++ LL++P+ + P N AA Y N+ E+ K+
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKK 151
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Frame = +3
Query: 189 MSTPARRRLMRDFKRLQEDPPTG-VS-GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKLT 356
+ P RL+ + + Q+ G +S G D+++ + W A I GP TP+E + L
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 357 IEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQ 518
I+ YP +PPTVRF +K+ V G+ L L+N WS +Y + +L I+
Sbjct: 62 IQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIR 118
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 52.8 bits (121), Expect = 2e-07
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 177 LKIKMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 356
LKI + + L +F + P G+ +P+ NN +W VIF F G F+
Sbjct: 12 LKIPGNILKEQALAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIFVRKGI-FGGGIFRFN 70
Query: 357 IEFTEEYPNKPPTVRFV---SKMFHPNVYADGG-ICLD-ILQNRWSPT-YDVSAILTSIQ 518
I E+P+ R + S +FHP + +CL+ W + + +L +Q
Sbjct: 71 IHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHSLRRVLVVLQ 130
Query: 519 -SLLS-DPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 632
S S D + + N A+ LYKE+R ++ + K CVE S
Sbjct: 131 RSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKECVEAS 170
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 207 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 386
RRLM++ L++ P P ++N+ W+ I G T FE G + I F +YP K
Sbjct: 13 RRLMKEAMELRQ-PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMK 71
Query: 387 PPTVRFVSKMFHPNVYADGGICLDIL---QNRWSPTYDVSAILTSIQSLLSDPNPNSPAN 557
PP + ++ + + +CL I W P++ + L ++ L P++P
Sbjct: 72 PPNLILLTP--NGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFL----PSTPGG 125
Query: 558 SMAAQLYKENRRE 596
++ + Y R+
Sbjct: 126 ALGSLDYPPKERQ 138
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 201 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 359
A +R+ ++ L DPP S +++ W A I GP ++P++ G F LTI
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 306 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 404
I GP DTP+E G F++ + F + YPN P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 507 TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 629
+S QS+ +D + A + AQL +E+RRE EKRVK EQ
Sbjct: 396 SSTQSIEADEDI---ARELDAQLIEESRRETEKRVKEEAEQ 433
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +3
Query: 192 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 371
S+ R R K ++ P+G G NN+ W +V D F DG + I
Sbjct: 64 SSENRDGTKRVVKHIRSLEPSGYEGGNEGNNLEAWQSV-QSNQDGVFPDGYDGINIIRNF 122
Query: 372 EYPNKPPTVRFVSKMFHP 425
YP PP+ R + +M P
Sbjct: 123 MYP-PPPSRRHIPEMKPP 139
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 297 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 401
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 297 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 401
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 507 TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 629
+S QS+ +D + A + AQL +E RRE EKRVK +Q
Sbjct: 396 SSTQSIEADEDI---ARELDAQLIEEARRETEKRVKEEADQ 433
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 364 LLKNIQINPQQYDLYQKCFIQMFTPMVES 450
LL N QI PQ L CF+Q+ P ++
Sbjct: 521 LLTNEQIKPQDAQLIGACFLQLRKPFAQT 549
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 364 LLKNIQINPQQYDLYQKCFIQMFTPMVES 450
LL N QI PQ L CF+Q+ P ++
Sbjct: 521 LLTNEQIKPQDAQLIGACFLQLRKPFAQT 549
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 345 MFHLQMEYHEGQISQHSRS*YC 280
+F L ++YH+ QIS H S +C
Sbjct: 154 LFRLLLQYHDPQISNHLESLHC 175
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 471 RWSPTYDVSAILTSIQSLLSDPNPNSPANS-MAAQLYKENRREYEKR 608
RWSP+ D + + + S+ SD N +S + S +A++ K Y R
Sbjct: 47 RWSPSADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVR 93
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 471 RWSPTYDVSAILTSIQSLLSDPNPNSPANS-MAAQLYKENRREYEKR 608
RWSP+ D + + + S+ SD N +S + S +A++ K Y R
Sbjct: 47 RWSPSADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVR 93
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 471 RWSPTYDVSAILTSIQSLLSDPNPNSPANS-MAAQLYKENRREYEKR 608
RWSP+ D + + + S+ SD N +S + S +A++ K Y R
Sbjct: 47 RWSPSADDRRLFSYVSSMRSDSNSSSKSPSPPSAKMSKRPNGPYSVR 93
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 364 LLKNIQINPQQYDLYQKCFIQMFTPMVES 450
LL N QI PQ L CF+Q+ P ++
Sbjct: 521 LLTNEQIKPQDAQLIGACFLQLRKPFAQT 549
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 364 LLKNIQINPQQYDLYQKCFIQMFTPMVES 450
LL N QI PQ L CF+Q+ P ++
Sbjct: 521 LLTNEQIKPQDAQLIGACFLQLRKPFAQT 549
>AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine
receptor, class w protein134 protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 617 CFHSLFVFSSILLVKLCGH 561
C H LF+FS IL + C H
Sbjct: 308 CNHCLFLFSMILTINTCSH 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,814,737
Number of Sequences: 27780
Number of extensions: 393620
Number of successful extensions: 986
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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