Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9k04
(474 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 27 0.067
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 0.47
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 23 1.1
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 23 1.4
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 1.9
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 2.5
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 21 5.8
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 5.8
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 27.5 bits (58), Expect = 0.067
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 334 CLYHFIAMLIIF*FNVTNLYNFMFYCLRDLILCI 435
C+Y+F + IIF + +FYC+ ++LCI
Sbjct: 211 CIYYFYSAFIIF------TIHLLFYCVLIILLCI 238
Score = 27.1 bits (57), Expect = 0.088
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 331 ICLYHFIAMLIIF*FNVTNLYNFMFYCLRDL-ILCI 435
+C+YHF IIF ++ F+F+ + L +LC+
Sbjct: 164 LCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCL 199
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +1
Query: 331 ICLYHFIAMLIIF*FNVTNLYNFMFYCLRDLILC 432
+C+Y+F I+F ++ L ++ L+ C
Sbjct: 236 LCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269
Score = 21.0 bits (42), Expect = 5.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 294 FYARA*FLKTLRYLLVSFYRYVNHILI*CNEFI*FYVLLSARLNFVY 434
+YA F L L+ +Y Y H+L C FI F + L L Y
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLF-CCAFIIFTMHLLFLLCIYY 287
Score = 20.6 bits (41), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 331 ICLYHFIAMLIIF*FNVTNLY-NFMFYC 411
+C+Y+F IIF ++ L + F+C
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFC 171
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.6 bits (51), Expect = 0.47
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSFTL 218
+L E I D+C HI+Y F +
Sbjct: 1417 YLPEDIDPDLCTHIVYGFAV 1436
Score = 23.4 bits (48), Expect = 1.1
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +3
Query: 144 RSQSNFLYEKI*DDICAHIMYSF 212
+++ F+ E I +C H++Y+F
Sbjct: 651 KAEGKFVPEHIDQRLCTHVVYAF 673
Score = 23.0 bits (47), Expect = 1.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSFTLFH 224
+L I D+C HI+Y F + +
Sbjct: 1842 YLPSDIDPDLCTHIVYGFAVLN 1863
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 23.4 bits (48), Expect = 1.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSF 212
F+ E I D+C HI Y+F
Sbjct: 42 FVPEDINPDLCTHINYAF 59
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 183 DICAHIMYSF 212
D+C HI+YSF
Sbjct: 49 DLCTHIVYSF 58
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 22.6 bits (46), Expect = 1.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 147 SQSNFLYEKI*DDICAHIMYSF 212
+ F E I +C H++YSF
Sbjct: 35 NNGKFTVEDIDPTLCTHLIYSF 56
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSF 212
F E I D+C HI+++F
Sbjct: 106 FTPEHIIPDLCTHIIFAF 123
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSF 212
F E I +C HI+Y+F
Sbjct: 541 FTPEDINPSLCTHIIYAF 558
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.0 bits (42), Expect = 5.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 159 FLYEKI*DDICAHIMYSF 212
F + I +C HI+YSF
Sbjct: 43 FTVDHIDPYLCTHIIYSF 60
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.0 bits (42), Expect = 5.8
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +1
Query: 262 GTIITKKTCAIF 297
G+++TK TC +F
Sbjct: 394 GSVVTKVTCELF 405
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,143
Number of Sequences: 336
Number of extensions: 2385
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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