Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9k04
         (474 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.25 
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       25   1.3  
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       23   7.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   9.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 348 KMIQANIAAFLKTRPLHKNRTSFFCY 271
           K+++AN+ AF+K  P+H+    F  Y
Sbjct: 715 KILKANLRAFIKESPMHEITDFFHAY 740


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 144 RSQSNFLYEKI*DDICAHIMYSFTL 218
           +    +L E I  D+C H++Y F +
Sbjct: 6   QGNGKYLPEDIDSDLCTHVVYGFAV 30


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 DICAHIMYSFTLFHLS 230
           D+C HI+Y F +   S
Sbjct: 19  DLCTHIVYGFAVLDYS 34


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 RYLLVSFYRYVNHILI 374
           R+ ++S Y Y NH+ I
Sbjct: 191 RWRIISIYSYSNHVYI 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,878
Number of Sequences: 2352
Number of extensions: 8935
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)