Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9k04
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p pro...    27   9.8  
AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA...    27   9.8  

>AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p
           protein.
          Length = 940

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 180 LISFHIKN*IDSDRCFKSMSYSLTVPFDQLEIA 82
           L S+H +N +D  RCF S S  L +    + +A
Sbjct: 736 LASYHARNVVDLLRCFNSRSCQLIIGAGAMRVA 768


>AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA
           protein.
          Length = 940

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 180 LISFHIKN*IDSDRCFKSMSYSLTVPFDQLEIA 82
           L S+H +N +D  RCF S S  L +    + +A
Sbjct: 736 LASYHARNVVDLLRCFNSRSCQLIIGAGAMRVA 768


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,521,761
Number of Sequences: 53049
Number of extensions: 336196
Number of successful extensions: 479
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)