Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9k01
         (406 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WY91 Cluster: THAP domain-containing protein 4; n=18;...    40   0.014
UniRef50_UPI00015B40B2 Cluster: PREDICTED: similar to THAP domai...    39   0.043
UniRef50_A7SVR2 Cluster: Predicted protein; n=1; Nematostella ve...    38   0.10 
UniRef50_A7SAW7 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.18 
UniRef50_A7RQP8 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.18 
UniRef50_UPI00015B548B Cluster: PREDICTED: similar to acyl-coenz...    35   0.54 
UniRef50_Q16VW6 Cluster: Phd finger domain; n=1; Aedes aegypti|R...    35   0.54 
UniRef50_Q7Q5H9 Cluster: ENSANGP00000021033; n=1; Anopheles gamb...    34   1.2  
UniRef50_Q08CB6 Cluster: Zgc:153292; n=2; Danio rerio|Rep: Zgc:1...    33   2.2  
UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_Q9ZDV1 Cluster: Putative uncharacterized protein RP223;...    33   2.9  
UniRef50_Q0DIM7 Cluster: Os05g0376400 protein; n=2; Oryza sativa...    33   2.9  
UniRef50_Q9H0W7 Cluster: THAP domain-containing protein 2; n=12;...    32   5.0  
UniRef50_Q1VRH1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_A5KCQ6 Cluster: Phist protein; n=1; Plasmodium vivax|Re...    31   6.6  
UniRef50_Q17814 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  

>UniRef50_Q8WY91 Cluster: THAP domain-containing protein 4; n=18;
           Euteleostomi|Rep: THAP domain-containing protein 4 -
           Homo sapiens (Human)
          Length = 577

 Score = 40.3 bits (90), Expect = 0.014
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +2

Query: 101 IGVHQF-LKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYL 277
           +  H+F LKD K     LKA+ R+  TPTK S LC + F +  +        ++  H+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 278 KKGAVPSIF 304
           K  AVPSIF
Sbjct: 77  KPTAVPSIF 85


>UniRef50_UPI00015B40B2 Cluster: PREDICTED: similar to THAP domain
           containing 4; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to THAP domain containing 4 - Nasonia
           vitripennis
          Length = 202

 Score = 38.7 bits (86), Expect = 0.043
 Identities = 24/61 (39%), Positives = 29/61 (47%)
 Frame = +2

Query: 149 LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMKPVS 328
           L AI R    P K   LC + F +SD    S   G K    +L   A+PSIFSW  K V 
Sbjct: 27  LDAIRRPNWKPKKGHGLCGEHFKKSDIITESYVGGYKLEKIHLSSKAIPSIFSWTPKNVK 86

Query: 329 E 331
           +
Sbjct: 87  K 87


>UniRef50_A7SVR2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 349

 Score = 37.5 bits (83), Expect = 0.10
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
 Frame = +2

Query: 47  LKIILSTMTRCFVPICS-------EIGVHQFLK---DKKIGRL*LKAI*REKSTPTKSS- 193
           L ++ +T   C VP C+       E+  H+      D++I +  L  I R++ +  K S 
Sbjct: 13  LCVVRTTSFHCCVPRCTGDSRYNTELTFHRIPSRPSDEEIRKKWLVKIRRDEGSSFKISS 72

Query: 194 --RLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMKPVS 328
             R+C + F E DY       G     + LK+G+VPSIF W+ +P S
Sbjct: 73  GTRVCSRHFSEEDYLAPDN-AG----RRMLKRGSVPSIFDWSSQPKS 114


>UniRef50_A7SAW7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 576

 Score = 36.7 bits (81), Expect = 0.18
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
 Frame = +2

Query: 62  STMTRCFVPIC-------SEIGVHQF---LKDKKIGRL*LKAI*REKSTPTKSS---RLC 202
           +T   C VP C       +E+  H+      D++I +  L  I R +    K S   R+C
Sbjct: 166 TTSFHCCVPRCIGDSRYNTELTFHRIPSRTSDEEIRKKWLVKIRRNEGPSFKISSGTRVC 225

Query: 203 RKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMKPVS 328
            + F+E DY       G     + LK+G+VPSIF W+ +P S
Sbjct: 226 SRHFIEEDYLAPDN-AG----RRMLKRGSVPSIFDWSSQPKS 262


>UniRef50_A7RQP8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 247

 Score = 36.7 bits (81), Expect = 0.18
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +2

Query: 125 DKKIGRL*LKAI*REKSTPTKSS---RLCRKQFVESDYENISKYTGVKH*HKYLKKGAVP 295
           D++I +  L  I R++    K S   R+C + F E DY  +    G     + LK+G+VP
Sbjct: 159 DEEIRKKWLVKIRRDEGPSFKISSGTRVCSRHFSEEDYLALDN-AG----QRMLKRGSVP 213

Query: 296 SIFSWNMKPVS 328
           SIF W+ +P S
Sbjct: 214 SIFDWSSQPKS 224


>UniRef50_UPI00015B548B Cluster: PREDICTED: similar to acyl-coenzyme
           A dehydrogenase; n=2; Nasonia vitripennis|Rep:
           PREDICTED: similar to acyl-coenzyme A dehydrogenase -
           Nasonia vitripennis
          Length = 1439

 Score = 35.1 bits (77), Expect = 0.54
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = +2

Query: 179 PTKSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFS 307
           PT S  +C + F +SDYE      G  H   +LKKG+VPSIF+
Sbjct: 49  PTSSQIVCYRHFRQSDYE-----IGRSH-KLFLKKGSVPSIFA 85


>UniRef50_Q16VW6 Cluster: Phd finger domain; n=1; Aedes aegypti|Rep:
           Phd finger domain - Aedes aegypti (Yellowfever mosquito)
          Length = 1048

 Score = 35.1 bits (77), Expect = 0.54
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +2

Query: 185 KSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNM-----KPVSEETK 340
           K S +C + F ++D+++   + G K+    LK GA+P+IFSW++     K V EE K
Sbjct: 52  KGSNVCSRHFRKADFQD---FKGKKY---VLKLGAIPTIFSWSIVATPKKEVKEEIK 102


>UniRef50_Q7Q5H9 Cluster: ENSANGP00000021033; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000021033 - Anopheles gambiae
           str. PEST
          Length = 1117

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +2

Query: 182 TKSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNM-KPVSEETKS 343
           TK+S +C + F  +D++   ++ G K+    LK G VP++F W + KP  E   S
Sbjct: 51  TKASNVCSRHFRRADFQ---EFKGKKY---VLKLGVVPTVFPWTVTKPPGEAGSS 99


>UniRef50_Q08CB6 Cluster: Zgc:153292; n=2; Danio rerio|Rep:
           Zgc:153292 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 415

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 98  EIGVHQF-LKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKY 274
           E   H+F L+D    R  L+ +  +   PT +S LC   F +  +E +         HK 
Sbjct: 25  EFSFHKFPLEDGLRVREWLRRMRWQNWWPTGNSVLCSDHFEKDCFEQVGS-------HKR 77

Query: 275 LKKGAVPSIFSW 310
           L+KGAVP+IF++
Sbjct: 78  LRKGAVPTIFNF 89


>UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 437

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = +2

Query: 185 KSSRLCRKQFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMKPVSEETKSR 346
           KSSR+C   F  SD+ N + ++      + LKKG+VP+++     P S+E K+R
Sbjct: 64  KSSRICSDHFQPSDFNNPNLFS------QGLKKGSVPTLY-----PASKEPKNR 106


>UniRef50_Q9ZDV1 Cluster: Putative uncharacterized protein RP223;
           n=9; Rickettsia|Rep: Putative uncharacterized protein
           RP223 - Rickettsia prowazekii
          Length = 398

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -3

Query: 233 FHSQIPQIVYDITSNFLWEYFFRVKWPLITVFQFSCPSGIDVLQFLSILAQNNAS 69
           FH++I +I+ D+TSN   +  F+    + T+ + S  S   V++  +    N+AS
Sbjct: 183 FHNEITEIIRDVTSNKQLKNIFKKATKVATILEISKESARKVIEIANKNPNNSAS 237


>UniRef50_Q0DIM7 Cluster: Os05g0376400 protein; n=2; Oryza sativa
           (japonica cultivar-group)|Rep: Os05g0376400 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 622

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 221 IPQIVYDITSNFLWEYFFRVKW-PLITVFQFSCPSGIDVLQFLSILAQNNASLCL 60
           IP  V+ +  N + +   R+KW PL+ +    CP GI+   +  +++  NA L +
Sbjct: 446 IPDYVFAVIDNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMSIQNAGLLM 500


>UniRef50_Q9H0W7 Cluster: THAP domain-containing protein 2; n=12;
           Mammalia|Rep: THAP domain-containing protein 2 - Homo
           sapiens (Human)
          Length = 228

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 26/85 (30%), Positives = 41/85 (48%)
 Frame = +2

Query: 101 IGVHQFLKDKKIGRL*LKAI*REKSTPTKSSRLCRKQFVESDYENISKYTGVKH*HKYLK 280
           I  H+F  D K  +  ++ + R+   P K + LC K F  S ++     TG     + LK
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTGQT---RRLK 72

Query: 281 KGAVPSIFSWNMKPVSEETKSREVM 355
             AVP+IF +     S + KSR ++
Sbjct: 73  MDAVPTIFDFCTHIKSMKLKSRNLL 97


>UniRef50_Q1VRH1 Cluster: Putative uncharacterized protein; n=1;
           Psychroflexus torquis ATCC 700755|Rep: Putative
           uncharacterized protein - Psychroflexus torquis ATCC
           700755
          Length = 231

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +1

Query: 46  IKNYFKHN---DALFCANMLRNWSTSIPEGQENWKTVIKGHLTRKKYSHKKFE 195
           IKN  ++N   D L   +M RN   +I   ++ WK +I   L +KKYS ++ E
Sbjct: 111 IKNIIENNMQDDGLNEKDMPRNKIENIERDKKGWKGIILEKLNKKKYSWEEAE 163


>UniRef50_A5KCQ6 Cluster: Phist protein; n=1; Plasmodium vivax|Rep:
           Phist protein - Plasmodium vivax
          Length = 372

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +3

Query: 198 YVVNNLWNLTMKTLVNTQVSNININI*RKVLYHLY--FHGI--*NQFLKKQKVEKLCNF 362
           Y +  LW+   +  +  +++N    I  K++YH+Y  FH +     F  K K+ KLC++
Sbjct: 227 YSILKLWDTIKERRLGDELTNPEDLIEDKIVYHIYNFFHSLERCKYFSLKNKLNKLCDY 285


>UniRef50_Q17814 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 430

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 46  IKNYF-KHNDALFCANMLRNWSTSIPEGQENWKTVIKGHL 162
           I  YF K +++ FC + L+N + SI E ++N+K  I   L
Sbjct: 5   IFQYFRKRSNSKFCGSFLQNVTESIRENEQNYKKTINNKL 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,471,253
Number of Sequences: 1657284
Number of extensions: 7391005
Number of successful extensions: 17562
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17556
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)