Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9j08
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 289 YSSAKKFLNKLCRLQEQF 236
           +S    FLNK+ RL E+F
Sbjct: 100 HSKIAHFLNKMIRLDERF 117



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 538 VVAFRTCIILIHSFVCHQTV 479
           V A    ++ ++S VCHQT+
Sbjct: 439 VEAMAYILLAMNSAVCHQTI 458


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 404 STVCACCSNKPVLPHTM 454
           ST+ A  SN P+ P+TM
Sbjct: 325 STITAPLSNPPLWPYTM 341


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 538 VVAFRTCIILIHSFVCHQTV 479
           V A    ++ ++S VCHQT+
Sbjct: 164 VEAMAYILLAMNSAVCHQTI 183


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 444 LILWDAVIFFVITVW 488
           L+L  +VIFF + VW
Sbjct: 145 LVLAASVIFFDVVVW 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,802
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)