Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9j08
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1819 + 40110697-40110721,40110818-40110828,40111228-401115... 38 0.008
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 36 0.023
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 36 0.023
01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350... 36 0.023
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 36 0.031
05_03_0471 - 14455543-14455650,14455925-14456002,14456121-144562... 35 0.053
02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501... 35 0.053
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 33 0.28
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960... 32 0.38
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 32 0.50
08_01_0961 - 9622444-9622928,9623011-9623102,9623862-9624002,962... 31 0.87
07_03_1780 - 29465873-29466130,29466236-29466335,29466473-294665... 31 1.1
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 30 2.0
12_02_1214 - 27061794-27062178,27063018-27063766,27064427-27064831 29 2.6
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 29 2.6
06_01_1014 - 7936514-7936530,7936768-7936859,7937290-7937581,793... 29 3.5
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 29 3.5
03_05_0513 - 25073518-25073623,25073719-25073777,25074048-250741... 29 3.5
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 29 3.5
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 29 3.5
04_04_0463 - 25397837-25399693,25402136-25402405 29 4.6
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 29 4.6
02_05_1148 - 34458732-34460627,34462299-34462547 29 4.6
12_02_1243 + 27300978-27301682 28 6.1
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 28 6.1
05_06_0046 - 25157093-25157431,25157810-25157928,25158024-251581... 28 6.1
05_03_0262 - 11222790-11222792,11222848-11222965,11223218-112233... 28 6.1
01_06_1224 - 35508842-35510404 28 6.1
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 28 8.1
10_08_0663 - 19666476-19667017,19667664-19667755,19668039-196680... 28 8.1
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 28 8.1
03_01_0298 + 2318836-2319051,2321238-2323106 28 8.1
>01_06_1819 +
40110697-40110721,40110818-40110828,40111228-40111572,
40111707-40111782,40113605-40113771,40113818-40114036
Length = 280
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 329 KFLKYVWWNKPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTMD 508
+FL+Y + P + P P C C N+ V P + C HIFC C+ A ++
Sbjct: 201 EFLQYTYQALPEPEKAVPKEPTFN----CPVCMNELVEPSSTICGHIFCKQCIKA--SIQ 254
Query: 509 QDYACPKC 532
CP C
Sbjct: 255 AQKKCPTC 262
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +2
Query: 338 KYVWWNKPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDY 517
K V H P P T C C NK P T C HIFC C+ A +
Sbjct: 298 KNVAQTSTTHAKVAPKEPTFT----CPVCLNKLDKPSTTNCGHIFCEKCIQA--WLKAQK 351
Query: 518 ACPKC 532
CP C
Sbjct: 352 KCPTC 356
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 410 VCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
+C+ CS+ P C H+FCY C+ + T D++ CP
Sbjct: 773 ICSRCSDPPEDVVVATCGHVFCYQCVHKSLTSDEN-VCP 810
>01_01_0475 +
3500385-3500880,3501078-3501154,3501851-3502019,
3502385-3502473,3502601-3502765,3502841-3502918,
3503087-3503190,3503317-3503422
Length = 427
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 281 TGISL-FNIIGLKQRLSKFLKYV--WWNKPVHTFSQPGAPNMTLS-TVCACCSNKPVLPH 448
TG+ L F + + +++ FL + +K H S + ++ + +CA C K P
Sbjct: 318 TGLYLTFKLTSVVEKVQSFLTALRALSHKDFHYGSYATSEQVSATGDMCAICQEKMHTPI 377
Query: 449 TMGCSHIFCYYCLVANKTMDQDYACPKC 532
+ C HIFC C+ ++ +++ CP C
Sbjct: 378 LLRCKHIFCEDCV--SEWFERERTCPLC 403
>01_06_0919 - 32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 404 STVCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
S +CA C++ P C H+FC C++ T D D CP
Sbjct: 967 SAICALCNDAPEDAVVTICGHVFCNQCILEQLTGD-DSVCP 1006
>05_03_0471 -
14455543-14455650,14455925-14456002,14456121-14456285,
14457151-14457261,14457863-14458024,14458462-14458538,
14459526-14460177
Length = 450
Score = 35.1 bits (77), Expect = 0.053
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 281 TGISL-FNIIGLKQRLSKFLKYV--WWNKPVHTFSQPGAPNMTLS-TVCACCSNKPVLPH 448
TG+ L F + + +++ FL V K VH S A + + +CA C K +P
Sbjct: 375 TGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATAEQVIAAGDMCAICQEKMHVPV 434
Query: 449 TMGCSHIFCYYCL 487
+ C HIFC C+
Sbjct: 435 LLRCKHIFCEDCV 447
>02_03_0412 -
18749430-18749587,18749696-18749857,18750062-18750194,
18751640-18751744,18751818-18751935,18752232-18752320,
18752407-18753660,18753785-18753831,18754285-18754339,
18754783-18754884
Length = 740
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTM-DQDY------ACPKCY 535
C C P+ P C HI+C+ C++ M +DY CP C+
Sbjct: 232 CPICLESPLCPQITSCGHIYCFPCILRYLLMGKEDYKGESWKKCPLCF 279
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 401 LSTVCACCSNKPVLPHTMGCS---HIFCYYCLVANKTMDQDYACPKCYHV 541
L +C+C + P M C H C L A+ + +++ CP C+H+
Sbjct: 1417 LCAICSCDVGDHITPRCMICQARYHSSCVEPLPASTQVTREWTCPFCFHL 1466
>07_03_1651 -
28395369-28395436,28395524-28395575,28395857-28396092,
28396362-28396419,28396509-28396577,28396686-28396791,
28397104-28397171,28397266-28397385,28398144-28398231,
28399433-28399534,28399699-28399757,28399866-28400003,
28400222-28400473,28400508-28400593,28401061-28401165,
28402351-28402516
Length = 590
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 353 NKPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYC 484
+KP + + + + +S C+ C + P + C HI+CY C
Sbjct: 179 DKPTISCNLFDSMRVDISLTCSICLDTVFDPVALSCGHIYCYLC 222
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKCYHVGKNFAKLTAS 571
CA C P T C H FC CL + CPKC + N T +
Sbjct: 164 CAICLEICFEPSTTPCGHSFCMKCL-KHAAAKCGKRCPKCRQLISNSRSCTVN 215
>08_01_0961 -
9622444-9622928,9623011-9623102,9623862-9624002,
9624460-9624506,9624581-9624639,9624780-9624940,
9625021-9625196,9625284-9625355,9625820-9625879,
9625997-9626191
Length = 495
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFC-----YYCLVANKT-----MDQDYACPKCYHVGKNFAKL 562
CA C + GC H FC Y C A+ + + CP C H +F +L
Sbjct: 321 CAICLDTECTVSAEGCGHEFCTKCALYLCATASSSTSIRGVPGSIPCPLCRHTIVSFVRL 380
Query: 563 TAS 571
T++
Sbjct: 381 TST 383
>07_03_1780 -
29465873-29466130,29466236-29466335,29466473-29466559,
29466682-29467000,29467097-29468567
Length = 744
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +2
Query: 308 GLKQRLSKFLKYVWWNKPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCL 487
G K++ K+L YVW V + VC+ C + L C +F + C+
Sbjct: 384 GRKKKKKKYLPYVWRGARVKRKWEEDD-----DYVCSVCHDCGELLMCDRCPSMFHHACV 438
Query: 488 VANKTMDQDYACPKC 532
T D+ CP C
Sbjct: 439 GLESTPQGDWFCPAC 453
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 458 CSHIFCYYCLVANKTMDQDYACP 526
C H+FCY C+ T D++ CP
Sbjct: 1010 CGHVFCYQCIYERITTDEN-MCP 1031
>12_02_1214 - 27061794-27062178,27063018-27063766,27064427-27064831
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 401 LSTVCACCSNKPVLPHT-MGCSHIFCYYCLVA 493
+ T CC K +GC+H FCY CL +
Sbjct: 195 VGTCSICCEEKRGAQMIKVGCAHTFCYSCLTS 226
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 458 CSHIFCYYCLVANKTMDQDYACPKC 532
C H FCY C+V + + D CP C
Sbjct: 75 CGHSFCYMCIVTHLSHKSD--CPCC 97
>06_01_1014 -
7936514-7936530,7936768-7936859,7937290-7937581,
7937690-7937759,7938131-7938223
Length = 187
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 374 SQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC 532
S + +M VC C + P + C H F + D++ ACP C
Sbjct: 112 SMCSSEDMCSENVCKICYDAPRSCFFIPCGHGFACFTCARRIAEDKNQACPIC 164
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +2
Query: 380 PGAPNMTLSTVCACCSNKPVLPHTMG-----CSHIFCYYCLVA--NKTMDQDYACPKCY 535
P P M+ ST NK +LP + CSH+F CLVA + CP+C+
Sbjct: 367 PLQPAMSGSTATCFICNKLLLPTDLHLVLPVCSHMFHQRCLVAWLRSRVTPLLCCPECH 425
>03_05_0513 -
25073518-25073623,25073719-25073777,25074048-25074185,
25074719-25074982,25075062-25075306,25075874-25076081
Length = 339
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +2
Query: 356 KPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYC 484
+P+ T + S C C + P+ + C H+FC C
Sbjct: 216 RPLMTMAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGC 258
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCL 487
CA C P + C H++C CL
Sbjct: 121 CALCKELLYQPAVLNCGHVYCMSCL 145
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 449 TMGCSHIFCYYCLVANKTMDQDYACPKC 532
T CSH+F ++C +++ +Y CP C
Sbjct: 11 TAECSHMFHFHC-ISSSVKHGNYVCPVC 37
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 449 TMGCSHIFCYYCLVANKTMDQDYACPKC 532
T CSH+F ++C+ +N +Y CP C
Sbjct: 110 TAECSHMFHFHCISSN-VKHGNYFCPIC 136
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVAN 496
C+ C N P T C+H FC CL+ +
Sbjct: 500 CSICRNVMEEPVTTPCAHNFCKKCLLGS 527
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +2
Query: 413 CACC--SNKPVLPH---TMGCSHIFCYYCLVANKTMDQDYACPKC 532
CA C + KP H T CSH F ++C+ AN + CP C
Sbjct: 86 CAICLTTMKPGQGHALFTAECSHTFHFHCIAANVKHGSN-NCPVC 129
>12_02_1243 + 27300978-27301682
Length = 234
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 374 SQPGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCL 487
S G + S C C P P C H+FC+ CL
Sbjct: 12 SSSGGADSGGSFECNICFELPQEPIVTLCGHLFCWPCL 49
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC 532
C C + + C H+F +CL +++ + CP C
Sbjct: 260 CIICREEMTTAKKLLCGHLFHVHCL--RSWLERQHTCPTC 297
>05_06_0046 -
25157093-25157431,25157810-25157928,25158024-25158189,
25158289-25158415,25158490-25158590,25158719-25158905,
25159000-25159100,25159220-25160194,25160325-25160423,
25160500-25160972,25161307-25161420,25161830-25161900,
25162015-25162086,25162334-25162377
Length = 995
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 449 TMGCSHIFCYYCLVANKTMDQDYACPKC 532
++ C+H+FC CL ++M +CP C
Sbjct: 30 SISCNHVFCNDCL--TESMKSTSSCPVC 55
>05_03_0262 -
11222790-11222792,11222848-11222965,11223218-11223318,
11223389-11223525,11225603-11225759,11225846-11225959,
11226349-11226477
Length = 252
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 152 KVMVVNYIPRVTQLDAVSLDIQVEELIKELFLQATKFIE 268
K+ + I RV Q DA LD+++ ++KE ++ ++
Sbjct: 43 KIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
>01_06_1224 - 35508842-35510404
Length = 520
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDY-ACPKC 532
C C + P C H+FC+ CL + ++ CP C
Sbjct: 194 CNICFDMASEPVVTSCGHLFCWPCLYQWLNVYSNHKECPVC 234
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC 532
C C ++P C H+FC C+ N + + CP C
Sbjct: 737 CGVCFDRPKEVVITKCFHLFCSPCIQRNLEI-RHRKCPGC 775
>10_08_0663 -
19666476-19667017,19667664-19667755,19668039-19668095,
19668304-19668447,19668567-19668613,19668733-19668791,
19668975-19669045,19669274-19669341,19669431-19669598,
19669885-19669944,19670075-19670251
Length = 494
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 10/66 (15%)
Frame = +2
Query: 404 STVCACCSNKPVLPHTMGCSHIFC-----YYCLVANKTMD-----QDYACPKCYHVGKNF 553
S +CA C + GC H FC Y C +N ++ CP C + +F
Sbjct: 298 SDLCAVCLERSCSVAAEGCCHEFCIKCALYLCSTSNTRVEFTGPPGSIPCPLCRNGIMSF 357
Query: 554 AKLTAS 571
KL ++
Sbjct: 358 TKLPST 363
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLV 490
C+ C P T C+H FC CLV
Sbjct: 311 CSICKQVMKEPLTTPCAHNFCKLCLV 336
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 449 TMGCSHIFCYYCLVANKTMDQDYACPKC 532
T CSH F ++C+ +N +Y CP C
Sbjct: 91 TAECSHEFHFHCISSN-VNHGNYVCPVC 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,740,700
Number of Sequences: 37544
Number of extensions: 309658
Number of successful extensions: 650
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -