Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9j08
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   3.0  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    25   3.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.2  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   6.9  
AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    23   6.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.1  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVA 493
           C  C    V P    C H FC  C +A
Sbjct: 247 CYVCRESFVDPIVTKCKHYFCERCALA 273


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVA 493
           C  C    V P    C H FC  C +A
Sbjct: 247 CYVCRESFVDPIVTKCKHYFCERCALA 273


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 199 CKLRYSSGRTYKRIVLA 249
           CKL Y+ GRTY  +V A
Sbjct: 711 CKLLYNRGRTYVPLVEA 727


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 VEELIKELFLQATKFIEELFGTGISLFNIIGLKQRLSKFL-KYVWWN 355
           +EE++  L L+  K    +  TG S   ++ LK+   KF+ K   WN
Sbjct: 327 LEEILPTLALETEKLRRTVEQTGKSSAELVRLKKLEEKFVSKKDRWN 373


>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 415 THSTQSHIWSSRLTKCMHRFVPPYIFQK 332
           TH   SH++ +   +  H  +PP +F++
Sbjct: 115 THPGVSHMFQAAAFRFGHSLIPPGLFRR 142


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 482  CLVANKTMDQDYACPKCYHVGK 547
            C++A K    D   P CY+V K
Sbjct: 1738 CMIAAKFEPHDNWLPPCYYVPK 1759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,726
Number of Sequences: 2352
Number of extensions: 13813
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)