Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9j08
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 39 0.004
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 37 0.012
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 36 0.021
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 36 0.027
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 35 0.048
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 33 0.19
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical... 32 0.45
Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical p... 31 0.78
Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical p... 31 0.78
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 31 0.78
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 31 1.0
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 31 1.0
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 31 1.0
AF003130-13|AAK73876.1| 220|Caenorhabditis elegans Hypothetical... 25 1.4
AC006833-4|AAF60948.1| 125|Caenorhabditis elegans Hypothetical ... 30 1.8
Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 29 4.2
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z93374-1|CAB07554.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 27 9.6
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 386 APNMTLSTVCACCSNKPVLPHTM-GCSHIFCYYCLVANKTMDQDYACPKC 532
A N T+ CA C ++ +LP T+ C H FC+ CL ++ + CP C
Sbjct: 15 AINSTIDKECAVCYSEMILPTTIPSCGHKFCFICL-KGVSVSNNGDCPIC 63
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC 532
CA C + P + C+H+FC +C+ +DQ CP C
Sbjct: 337 CAVCHGDLLQPIKLECTHVFCKFCI--ETWLDQKSTCPIC 374
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 410 VCACCSNKPVLPHTM-GCSHIFCYYCLVANKTMDQDYACPKC 532
+C C K +P + C H FCY CL +N M D CP C
Sbjct: 106 ICYICYYKLTIPTRIENCGHEFCYVCLKSNFAMGND--CPVC 145
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVA-NKTMDQDYACPKC 532
C C ++ P + C H FCY CL + T+ ++ CP+C
Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPEC 83
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVA-NKTMDQDYACPKC 532
C C ++ P + C H FCY CL + T+ ++ CP+C
Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPEC 83
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 386 APNMTLSTVCACCSNKPVLPHTM-GCSHIFCYYCLVANKTMDQDYACPKC 532
A N + C C K ++P T+ C H FC+ CL M+ CP C
Sbjct: 3 AMNANIDAECPICQCKMIVPTTIPACGHKFCFICL-KGVYMNDMGGCPMC 51
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.027
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 401 LSTVCACCSNKPVLPHTMGCSHIFCYYCL 487
++ +C C N P P + C+H FCY C+
Sbjct: 1 MTDICTICHNTPNRPVRLDCNHEFCYICI 29
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 410 VCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC 532
+C C + V PHT+ C H FC C+ ++ + CP C
Sbjct: 99 LCTICYDIIVEPHTLRCQHSFCKKCI--DQCLPLTRKCPSC 137
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHTMG-CSHIFCYYCLVANKTMDQDYACPKC 532
C+ C N+ + ++ C H FCY C+V T CP C
Sbjct: 41 CSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCPMC 81
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHT-MGCSHIFCYYCLVANKTMDQDYACPKC 532
C C V+P C H+ CY C+ ++ M CP C
Sbjct: 216 CVVCDKPSVIPMVGQKCGHVACYTCIATSRNM----TCPLC 252
>AL033514-11|CAA22083.2| 298|Caenorhabditis elegans Hypothetical
protein Y75B8A.10 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 458 CSHIFCYYCLVANKTMDQDYACPKCYHVGKNFAKL 562
CSH+FC CL D D CP C +F +L
Sbjct: 188 CSHVFCETCLATASKWDFD-GCPVCRAPDTDFIRL 221
>Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 382 WSSKYDFEYCVCLLLKQTSIASYYGMQSYFL 474
W S CVC+L + S+ Y+ ++SYF+
Sbjct: 192 WDSFIGTFLCVCILFRSESLMLYFALKSYFV 222
>Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 382 WSSKYDFEYCVCLLLKQTSIASYYGMQSYFL 474
W S CVC+L + S+ Y+ ++SYF+
Sbjct: 192 WDSFIGTFLCVCILFRSESLMLYFALKSYFV 222
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKCYHVGKN 550
C C N V P C H FC C A K+ + CP C +N
Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGC--ALKSFQKSSKCPICQQNTEN 284
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +2
Query: 419 CC---SNKPVLPHTMGCSHIFCYYCLVAN-KTMDQDYACP 526
CC N+ LP M C H C+ C+++ D + CP
Sbjct: 193 CCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPICP 232
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKC-YHVG 544
CA C + V P + C H +C +C+ ++ +++ CP C H G
Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHLNINE--KCPLCRAHTG 50
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKCYHVGKN 550
C C N V P C H FC C A K+ + CP C +N
Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGC--ALKSFQKSSKCPICQQNTEN 284
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 407 TVCACCSNKPVLPHTMGCSHIFCYYC 484
T C C K + +GC+HI C +C
Sbjct: 189 TECCVCDGKEKVIFDLGCNHITCQFC 214
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 395 MTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTM--DQDYACPKC 532
M + C C +P + C H+FC C+ KTM + CPKC
Sbjct: 776 MKETLTCPSCKTRPKDCIMLKCYHLFCETCI---KTMYDTRQRKCPKC 820
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 395 MTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTM--DQDYACPKC 532
M + C C +P + C H+FC C+ KTM + CPKC
Sbjct: 779 MKETLTCPSCKTRPKDCIMLKCYHLFCETCI---KTMYDTRQRKCPKC 823
>AF003130-13|AAK73876.1| 220|Caenorhabditis elegans Hypothetical
protein F55A12.10 protein.
Length = 220
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 470 FCYYCLVANKTMDQDYACPK 529
FC+ C + KT+ D + PK
Sbjct: 39 FCHLCKIPTKTLKMDASLPK 58
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYC 484
C C +K T CSH+FC C
Sbjct: 9 CGCSPSKRQFFIT-ACSHVFCETC 31
>AC006833-4|AAF60948.1| 125|Caenorhabditis elegans Hypothetical
protein ZK616.3 protein.
Length = 125
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 380 PGAPNMTLSTVCACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
P P+ T++ C C + ++ H G Y C+ ++ T D CP
Sbjct: 40 PTFPDGTINWQCPCMAGGSLVAHRCGNFFRELYICMKSDDTRDPSEKCP 88
>Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical
protein T10C6.2 protein.
Length = 369
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 382 WSSKYDFEYCVCLLLKQTSIASYYGMQSYFL 474
W S CVC+L S+ Y+ ++SYF+
Sbjct: 214 WDSFIGTFLCVCILFGSESLMLYFALKSYFV 244
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 458 CSHIFCYYCLVANKTMDQDYACPKC 532
C H FC C+ D++CP C
Sbjct: 143 CLHAFCIRCIANEMEYRHDFSCPIC 167
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 413 CACCSNK-PVLPHTMGCSHIFCYYCL 487
CA C N +P T+ C H FC+ C+
Sbjct: 40 CAVCLNIFQGIPQTLTCGHSFCHRCI 65
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 413 CACCS---NKPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
C+ C+ N+ LP ++ C H+ C C A K +Q CP
Sbjct: 16 CSICNRHFNETFLPVSLICGHVICRKC--AEKPENQTKPCP 54
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 413 CACCS---NKPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
C+ C+ N+ LP ++ C H+ C C A K +Q CP
Sbjct: 16 CSICNRHFNETFLPVSLICGHVICRKC--AEKPENQTKPCP 54
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 413 CACCSNKPVLPHTMGCSHIFCYYCLVANKTMDQDYACPKCYHV 541
C C + P C HIFC C+ A + CP C V
Sbjct: 21 CGICCSTYKDPILSTCFHIFCRSCINACFERKRKVQCPICRSV 63
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 443 PHTMGCSHIFCYYCL 487
PH + CSH FC CL
Sbjct: 29 PHVLPCSHTFCLMCL 43
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 458 CSHIFCYYCLVANKTMDQDYACPKC 532
CSHIF CL D CPKC
Sbjct: 393 CSHIFHEKCLHTYLLQRTDQTCPKC 417
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 341 YVWWNKPVHTFSQPGAPNMTLSTVCACCSNKPVLPHTMGC---SHIFCYYC 484
YV P QPG N+ ++ +N P L + +GC + +F YC
Sbjct: 19 YVEKKDPKSILPQPGKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYC 69
>Z93374-1|CAB07554.1| 346|Caenorhabditis elegans Hypothetical
protein C06C6.2 protein.
Length = 346
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 382 WSSKYDFEYCVCLLLKQTSIASYYGMQSYFL 474
W S C C+L S+ Y+ ++SY +
Sbjct: 193 WDSFIGMSLCTCILFGSESLMLYFALKSYLV 223
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +2
Query: 410 VCACCSN-----KPVLPHTMGCSHIFCYYCLVANKTMDQDYACP 526
+C CS K +P + C H C+ C+ + + CP
Sbjct: 182 MCEICSREYEDTKERVPRVLDCGHTICHECITRIHKPTEPFKCP 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,029
Number of Sequences: 27780
Number of extensions: 314447
Number of successful extensions: 769
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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