Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9j06
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   0.90 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    24   3.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   8.4  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   8.4  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   8.4  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -3

Query: 402 STITVSTATVQAMAASLPRSAVPAPNTNPATFHIGVSTVGLTLYSLMSCSNFSLCFFS-- 229
           S I+VS+ TV  +   L RS  P P+  PA+  I    V     + +   + SL  F   
Sbjct: 466 SDISVSSETVVQVLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKIFNLSLSLGVFPAL 525

Query: 228 WSHMCWM 208
           W   CW+
Sbjct: 526 WK-SCWL 531


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 156 RSAPNSPA*STRIIWSRCGFFFQ 88
           R   N PA S   +W+RC F ++
Sbjct: 279 RQLKNQPARSADDLWTRCKFMWE 301


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 174 WQSWAAQLKDP 206
           W+SW + LKDP
Sbjct: 427 WRSWLSVLKDP 437


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 174 WQSWAAQLKDP 206
           W+SW + LKDP
Sbjct: 427 WRSWLSVLKDP 437


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 174 WQSWAAQLKDP 206
           W+SW + LKDP
Sbjct: 405 WRSWLSVLKDP 415


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 278 VRPTVLTPIWNVAGFVLGAGTALLGKEAAMACTVAV 385
           VRP+  TP   V G++  +G + + +  + A    V
Sbjct: 139 VRPSACTPDSRVGGYIDASGGSPVSRAGSAAAATGV 174


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 278 VRPTVLTPIWNVAGFVLGAGTALLGKEAAMACTVAV 385
           VRP+  TP   V G++  +G + + +  + A    V
Sbjct: 139 VRPSACTPDSRVGGYIDASGGSPVSRAGSAAAAAGV 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,385
Number of Sequences: 2352
Number of extensions: 14460
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)