Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9j06
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003185-1|AAH03185.1| 217|Homo sapiens coenzyme Q7 homolog, ub... 241 1e-63
BC043272-1|AAH43272.1| 194|Homo sapiens COQ7 protein protein. 241 2e-63
AK024291-1|BAB14876.1| 217|Homo sapiens protein ( Homo sapiens ... 241 2e-63
AF374413-1|AAM21346.1| 179|Homo sapiens placental protein KG-20... 241 2e-63
AF098948-1|AAD43648.1| 217|Homo sapiens COQ7 protein protein. 241 2e-63
AF032900-1|AAC69451.1| 179|Homo sapiens timing protein CLK-1 pr... 239 6e-63
U81276-1|AAC51120.1| 46|Homo sapiens CLK-1 protein. 75 2e-13
AK123294-1|BAC85575.1| 210|Homo sapiens ne. protein. 30 8.2
>BC003185-1|AAH03185.1| 217|Homo sapiens coenzyme Q7 homolog,
ubiquinone (yeast) protein.
Length = 217
Score = 241 bits (591), Expect = 1e-63
Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVTFRVRP 108
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 109 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 168
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 169 QLIKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>BC043272-1|AAH43272.1| 194|Homo sapiens COQ7 protein protein.
Length = 194
Score = 241 bits (590), Expect = 2e-63
Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 26 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVMFRVRP 85
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 86 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 145
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 146 QLIKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 194
>AK024291-1|BAB14876.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ14229 fis, clone NT2RP3004155, highly similar to
Homo sapiens COQ7 protein mRNA. ).
Length = 217
Score = 241 bits (590), Expect = 2e-63
Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVMFRVRP 108
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 109 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 168
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 169 QLIKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>AF374413-1|AAM21346.1| 179|Homo sapiens placental protein KG-20
protein.
Length = 179
Score = 241 bits (590), Expect = 2e-63
Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 11 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVMFRVRP 70
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 71 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 130
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 131 QLIKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 179
>AF098948-1|AAD43648.1| 217|Homo sapiens COQ7 protein protein.
Length = 217
Score = 241 bits (590), Expect = 2e-63
Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVMFRVRP 108
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 109 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 168
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 169 QLIKKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>AF032900-1|AAC69451.1| 179|Homo sapiens timing protein CLK-1
protein.
Length = 179
Score = 239 bits (585), Expect = 6e-63
Identities = 112/169 (66%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Frame = +2
Query: 107 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINEYRVRP 286
+D+IIRVDHAGE GA+RIYAGQM VLGRT+ GP+IQ MWDQEK H +KF +L+ +RVRP
Sbjct: 11 VDRIIRVDHAGEYGANRIYAGQMRVLGRTSVGPVIQKMWDQEKDHLKKFNELMVMFRVRP 70
Query: 287 TVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEIL 463
TVL P+WNV GF LGAGTALLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L
Sbjct: 71 TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELL 130
Query: 464 ETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
+ I +FRDEE EHHD GL H AE AP Y L +I+AGCR AI LS+++
Sbjct: 131 QLIRKFRDEELEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL 179
>U81276-1|AAC51120.1| 46|Homo sapiens CLK-1 protein.
Length = 46
Score = 74.9 bits (176), Expect = 2e-13
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +2
Query: 218 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTALLG 352
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGTALLG
Sbjct: 2 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLG 46
>AK123294-1|BAC85575.1| 210|Homo sapiens ne. protein.
Length = 210
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 224 PTCAG*GVLQLCGPRLPFVPR 162
PTCA L LCGPR P VPR
Sbjct: 109 PTCAC-SRLALCGPRFPHVPR 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,077,475
Number of Sequences: 237096
Number of extensions: 2255083
Number of successful extensions: 10413
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10395
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -