Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9j06
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ...   280   1e-75
AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ...   280   1e-75
AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA...   280   1e-75
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    29   7.2  

>AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score =  280 bits (686), Expect = 1e-75
 Identities = 126/173 (72%), Positives = 151/173 (87%)
 Frame = +2

Query: 92  KKNPHLDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINE 271
           + N   D+IIRVDHAGELGADRIYAGQMA+LG    G  I HMW+QEK+HR++FEQLI +
Sbjct: 47  RPNALTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQFEQLIQQ 106

Query: 272 YRVRPTVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLMQDPNVD 451
           +RVRPT++TPIWNVAGFVLGAGTAL+G++AAMACTVAVETVIV+HYNDQLR +M+ PN D
Sbjct: 107 HRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVEHYNDQLRQIMEAPNPD 166

Query: 452 KEILETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
           KE+L TIT+FRDEEQEHHD G+ HGAEQAP Y+A+TE+IK GC+ AI +SKKI
Sbjct: 167 KELLATITKFRDEEQEHHDTGIDHGAEQAPFYQAMTEVIKFGCKTAIAISKKI 219


>AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score =  280 bits (686), Expect = 1e-75
 Identities = 126/173 (72%), Positives = 151/173 (87%)
 Frame = +2

Query: 92  KKNPHLDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINE 271
           + N   D+IIRVDHAGELGADRIYAGQMA+LG    G  I HMW+QEK+HR++FEQLI +
Sbjct: 47  RPNALTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQFEQLIQQ 106

Query: 272 YRVRPTVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLMQDPNVD 451
           +RVRPT++TPIWNVAGFVLGAGTAL+G++AAMACTVAVETVIV+HYNDQLR +M+ PN D
Sbjct: 107 HRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVEHYNDQLRQIMEAPNPD 166

Query: 452 KEILETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
           KE+L TIT+FRDEEQEHHD G+ HGAEQAP Y+A+TE+IK GC+ AI +SKKI
Sbjct: 167 KELLATITKFRDEEQEHHDTGIDHGAEQAPFYQAMTEVIKFGCKTAIAISKKI 219


>AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA
           protein.
          Length = 219

 Score =  280 bits (686), Expect = 1e-75
 Identities = 126/173 (72%), Positives = 151/173 (87%)
 Frame = +2

Query: 92  KKNPHLDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIQHMWDQEKKHREKFEQLINE 271
           + N   D+IIRVDHAGELGADRIYAGQMA+LG    G  I HMW+QEK+HR++FEQLI +
Sbjct: 47  RPNALTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQFEQLIQQ 106

Query: 272 YRVRPTVLTPIWNVAGFVLGAGTALLGKEAAMACTVAVETVIVDHYNDQLRTLMQDPNVD 451
           +RVRPT++TPIWNVAGFVLGAGTAL+G++AAMACTVAVETVIV+HYNDQLR +M+ PN D
Sbjct: 107 HRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVEHYNDQLRQIMEAPNPD 166

Query: 452 KEILETITRFRDEEQEHHDAGLQHGAEQAPGYRALTELIKAGCRAAIQLSKKI 610
           KE+L TIT+FRDEEQEHHD G+ HGAEQAP Y+A+TE+IK GC+ AI +SKKI
Sbjct: 167 KELLATITKFRDEEQEHHDTGIDHGAEQAPFYQAMTEVIKFGCKTAIAISKKI 219


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -1

Query: 251 ISPCASFPGPTCAG*GVLQLCGPRLPFVPRRCG-PRPI 141
           +SPC     P C G   L  CGP  P     CG P PI
Sbjct: 111 VSPCCGPHSPPCCGSHSLPCCGPHSP----PCGAPSPI 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,017,073
Number of Sequences: 53049
Number of extensions: 668553
Number of successful extensions: 2686
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2679
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)