Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9j01
         (324 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23517-8|AAM98041.1|  605|Caenorhabditis elegans A kinase anchor...    36   0.009
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor...    36   0.009
Z93390-7|CAB07677.1|  931|Caenorhabditis elegans Hypothetical pr...    33   0.036
AL032675-2|CAA21780.1|  931|Caenorhabditis elegans Hypothetical ...    33   0.036
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    33   0.047
AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral signa...    28   1.3  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    28   1.8  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    28   1.8  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    28   1.8  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    28   1.8  
Z22181-10|CAA80187.1|  266|Caenorhabditis elegans Hypothetical p...    27   4.1  
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.       26   5.4  
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor...    25   9.5  
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch...    25   9.5  

>U23517-8|AAM98041.1|  605|Caenorhabditis elegans A kinase anchor
           protein protein1, isoform c protein.
          Length = 605

 Score = 35.5 bits (78), Expect = 0.009
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 3   SEVEVGEEARGVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSC 152
           SE+++G+ +    W+PDS  P C  C+  F +            + CGSC
Sbjct: 527 SELQLGKTSP--YWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLCGSC 574


>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
           protein protein1, isoform b protein.
          Length = 1284

 Score = 35.5 bits (78), Expect = 0.009
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 3   SEVEVGEEARGVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSC 152
           SE+++G+ +    W+PDS  P C  C+  F +            + CGSC
Sbjct: 527 SELQLGKTSP--YWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLCGSC 574


>Z93390-7|CAB07677.1|  931|Caenorhabditis elegans Hypothetical
           protein VT23B5.2 protein.
          Length = 931

 Score = 33.5 bits (73), Expect = 0.036
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 42  WLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCA 155
           W+ D    RC  C H F LA           IFC +C+
Sbjct: 860 WVQDVTRQRCDDCEHKFTLADRKHHCRNCGQIFCSTCS 897


>AL032675-2|CAA21780.1|  931|Caenorhabditis elegans Hypothetical
           protein VT23B5.2 protein.
          Length = 931

 Score = 33.5 bits (73), Expect = 0.036
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 42  WLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCA 155
           W+ D    RC  C H F LA           IFC +C+
Sbjct: 860 WVQDVTRQRCDDCEHKFTLADRKHHCRNCGQIFCSTCS 897


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 33.1 bits (72), Expect = 0.047
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 163 LSSAHDPQNIPPHRL--QWWRLLASQKWWWQCW 71
           +S  HD Q I  H L  QW+  L + KWW   W
Sbjct: 446 ISQKHDVQEIVAHELAHQWFGNLVTMKWWNDLW 478


>AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral
           signaling target protein 2 protein.
          Length = 661

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 33  GVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCA 155
           GV W+PD    +C  C   F              IFC  C+
Sbjct: 560 GVRWVPDEDCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCS 600


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 39   TWLPDSAAPRCQHCHHHFW 95
            T  P +   RC+HC H +W
Sbjct: 2056 TCRPGATGMRCEHCEHGYW 2074


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 39   TWLPDSAAPRCQHCHHHFW 95
            T  P +   RC+HC H +W
Sbjct: 2056 TCRPGATGMRCEHCEHGYW 2074


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 39   TWLPDSAAPRCQHCHHHFW 95
            T  P +   RC+HC H +W
Sbjct: 2056 TCRPGATGMRCEHCEHGYW 2074


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 39   TWLPDSAAPRCQHCHHHFW 95
            T  P +   RC+HC H +W
Sbjct: 2056 TCRPGATGMRCEHCEHGYW 2074


>Z22181-10|CAA80187.1|  266|Caenorhabditis elegans Hypothetical
           protein ZK632.12 protein.
          Length = 266

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
 Frame = +3

Query: 27  ARGVTWLPDSAAPRCQHC-HHHFWLAXXXXXXXXXXXIFCGSCA 155
           A    W+PD  A +C  C    F L            + CG+C+
Sbjct: 144 AHAAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACS 187


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3

Query: 24  EARGVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCAE 158
           E   V WL D+ A  C  C   F L            + C SC++
Sbjct: 170 EREVVPWLDDAEAVCCPLCASRFGLTRRRHHCRLCGRVLCHSCSK 214


>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
            T10G3.5b protein.
          Length = 1203

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 42   WLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCAELS 164
            WL D+ A  C  C   F L            I+C  C+  S
Sbjct: 1141 WLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKS 1181


>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
            T10G3.5a protein.
          Length = 1205

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 42   WLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCAELS 164
            WL D+ A  C  C   F L            I+C  C+  S
Sbjct: 1143 WLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKS 1183


>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
          Length = 1205

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 42   WLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSCAELS 164
            WL D+ A  C  C   F L            I+C  C+  S
Sbjct: 1143 WLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSSKS 1183


>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
           protein protein1, isoform a protein.
          Length = 1280

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 3   SEVEVGEEARGVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSC 152
           SE+++G+ +    W+PDS  P C      F +            + CGSC
Sbjct: 527 SELQLGKTSP--YWIPDSECPNCM----LFTIITRRHHCRACGRVLCGSC 570


>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
           protein protein.
          Length = 1280

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 3   SEVEVGEEARGVTWLPDSAAPRCQHCHHHFWLAXXXXXXXXXXXIFCGSC 152
           SE+++G+ +    W+PDS  P C      F +            + CGSC
Sbjct: 527 SELQLGKTSP--YWIPDSECPNCM----LFTIITRRHHCRACGRVLCGSC 570


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,472,539
Number of Sequences: 27780
Number of extensions: 54020
Number of successful extensions: 196
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)