Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9i23
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 315 ILDECYINIFILYDYEGILKFNYFLE 238
           I+   Y   ++ +DY    K NYF+E
Sbjct: 200 IIPANYSGWYLNHDYNLENKLNYFIE 225


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 316 QFCDNVTRVYRHHI 357
           ++CD +T VYR  +
Sbjct: 115 KYCDGLTSVYRMQV 128


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 236 FKKYNLVI*ESRHIIDSVGYRNYY 165
           F  YN  I + +H+  +   RNYY
Sbjct: 371 FLDYNYTIPKEKHVEVARLIRNYY 394


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 236 FKKYNLVI*ESRHIIDSVGYRNYY 165
           F  YN  I + +H+  +   RNYY
Sbjct: 371 FLDYNYTIPKEKHVEVARLIRNYY 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,273
Number of Sequences: 438
Number of extensions: 3107
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)