Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9i10
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    25   1.7  
Z70269-2|CAA94224.1|  143|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.0  

>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 25.4 bits (53), Expect(2) = 1.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 155 FLIDHCIFFVPILFMNVVEFL 217
           FLID C F+  ++ + VV F+
Sbjct: 88  FLIDFCAFYFTLILLLVVHFI 108



 Score = 23.0 bits (47), Expect(2) = 1.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 269 VIIKCYYWYYFVCDFKK 319
           +++   Y Y  VCDFKK
Sbjct: 103 LVVHFIYRYVVVCDFKK 119


>Z70269-2|CAA94224.1|  143|Caenorhabditis elegans Hypothetical
           protein ZK1086.2 protein.
          Length = 143

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 167 HCIFFVPILFMNVVEFLVSVSNLF 238
           H +F VP+LF+ V   L  ++N F
Sbjct: 100 HALFLVPLLFLQVFVLLYGITNYF 123


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 155 FLIDHCI-FFVPILFMN--VVEFLVSVSNLFYNRFSLSVHAVIIKCY 286
           F    CI  F+P+ F++  V  F+++  N +YN+ + ++  + I C+
Sbjct: 239 FFYSMCIQIFIPVAFISLPVSYFVMASENDYYNQAATNIAMIAIACH 285


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 155 FLIDHCI-FFVPILFMN--VVEFLVSVSNLFYNRFSLSVHAVIIKCY 286
           F    CI  F+P+ F++  V  F+++  N +YN+ + ++  + I C+
Sbjct: 239 FFYSMCIQIFIPVAFISLPVSYFVMASENDYYNQAATNIAMIAIACH 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,002,173
Number of Sequences: 27780
Number of extensions: 233817
Number of successful extensions: 463
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)