Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9i06
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.9  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   4.4  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   5.9  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        23   5.9  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      23   5.9  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   7.8  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 326 VVSMIWPTQLPVWWQIPSERP 388
           +VS ++PT  PV W + S+ P
Sbjct: 459 IVSDLFPTHPPVSWPVSSDAP 479


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 253 LPTEYNGSL--VIYYRIIRPYYQKHHGRIDDMANTASRLVADTIRK 384
           LP ++ G+L  VI   I+  ++QKHH       N A   + D + K
Sbjct: 39  LPYDF-GALEPVICREIMELHHQKHHNAYVTNLNAAEEQLQDAVAK 83


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 177 NISSMACFCRSDFVLCCLYTLVIWMPLC 94
           N+    CFC+ ++V   +    IW   C
Sbjct: 66  NVCVAGCFCKKNYVRRAIGGSCIWAKKC 93


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -3

Query: 447 CNLYYLNFI*NI-CKKRAGLIGLSDGICHQTGSCVGHIIDTTMMLLVVRTND 295
           C L+  + + +I CK    + G + G C+  G C     D   +L  +   D
Sbjct: 42  CKLFTADVVSSITCKMYCVIKGKTGGYCNSEGLCTCRAEDLHFLLKPIINKD 93


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -3

Query: 447 CNLYYLNFI*NI-CKKRAGLIGLSDGICHQTGSCVGHIIDTTMMLLVVRTND 295
           C L+  + + +I CK    + G + G C+  G C     D   +L  +   D
Sbjct: 29  CKLFTADVVSSITCKMYCVIKGKTGGYCNSEGLCTCRAEDLHFLLKPIINKD 80


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 273 VPRDLLPYHSSLLPEASWSYR 335
           V + +LP H+S LP+ S+ +R
Sbjct: 442 VKQGILPKHASNLPDVSFVHR 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,357
Number of Sequences: 2352
Number of extensions: 12273
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)