Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9h23
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   6.8  
DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        23   9.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 216 ANYKRVKQL*WCKITLHSINF 154
           A++KR K   WC+   H++++
Sbjct: 239 ASFKRAKTCDWCRHVRHAVSY 259


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 574 SSFRGRGRMYSPAPQGSHGHTKKKFIPGVLP 666
           +S  G+ R  +PAP    GH     +PG  P
Sbjct: 42  ASLLGKQRPLAPAPTVLGGHRANAKLPGAGP 72


>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 228 KKAIIQLSLALSQLTILHACEKIRKP 305
           K+ I +    ++  TI H CE  +KP
Sbjct: 14  KRVIEKAKARINSTTIEHECEDYKKP 39


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 612 SWRVHSPTSPERTFP 568
           SWR + PT  +RT P
Sbjct: 91  SWRAYDPTGFQRTSP 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,810
Number of Sequences: 2352
Number of extensions: 14986
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)