Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9h19
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022964-1|AAH22964.1|  756|Homo sapiens chromosome 1 open readi...   171   2e-42
AL022398-9|CAA18546.1|  756|Homo sapiens chromosome 1 open readi...   171   2e-42
D25278-1|BAA04968.2|  632|Homo sapiens KIAA0036 protein.               30   4.5  
BC005806-1|AAH05806.1|  465|Homo sapiens IQ motif containing B1 ...    30   4.5  
AY964668-1|AAY46030.1|  598|Homo sapiens p53 and DNA damage-regu...    30   4.5  
AY714228-1|AAW47233.1|  598|Homo sapiens nephrocystin 5 protein.       30   4.5  
AY964667-1|AAY46029.1|  465|Homo sapiens p53 and DNA damage-regu...    29   7.8  

>BC022964-1|AAH22964.1|  756|Homo sapiens chromosome 1 open reading
            frame 107 protein.
          Length = 756

 Score =  171 bits (415), Expect = 2e-42
 Identities = 73/161 (45%), Positives = 109/161 (67%)
 Frame = +2

Query: 2    IKEVLPKQRDTLMSHTLIYVPSYFDYVRIRNYFKKEDISFVQICEYSKDAKIARARDMFF 181
            + ++LP+ RD +MSHTLIY+PSYFD+VR+RNYFKKE+++F  ICEY++ + ++RAR  F 
Sbjct: 599  VNKILPQYRDAVMSHTLIYIPSYFDFVRLRNYFKKEELNFTHICEYTQKSGVSRARHFFL 658

Query: 182  HTEAHFLLYSERVHFFRRFRIKGIRHIIFYQPPTYPHFYSEMCNLMQESNQNKYGGSECN 361
              E  FLL++ER HF++R+ IKGIR++IFY+ PTYPHFYSE+CN+++ +N+    G E  
Sbjct: 659  QGEKQFLLFTERFHFYKRYTIKGIRNLIFYELPTYPHFYSEICNMLRATNR----GEEAT 714

Query: 362  MTVSVLYCRCXXXXXXXXXXXXXXXXXXXXXXPVHMYVTGD 484
             T +VLY +                        VH+++TG+
Sbjct: 715  WTCTVLYSKYDAQRLAAVVGVERAAQMLQSNKNVHLFITGE 755


>AL022398-9|CAA18546.1|  756|Homo sapiens chromosome 1 open reading
            frame 107 protein.
          Length = 756

 Score =  171 bits (415), Expect = 2e-42
 Identities = 73/161 (45%), Positives = 109/161 (67%)
 Frame = +2

Query: 2    IKEVLPKQRDTLMSHTLIYVPSYFDYVRIRNYFKKEDISFVQICEYSKDAKIARARDMFF 181
            + ++LP+ RD +MSHTLIY+PSYFD+VR+RNYFKKE+++F  ICEY++ + ++RAR  F 
Sbjct: 599  VNKILPQYRDAVMSHTLIYIPSYFDFVRLRNYFKKEELNFTHICEYTQKSGVSRARHFFL 658

Query: 182  HTEAHFLLYSERVHFFRRFRIKGIRHIIFYQPPTYPHFYSEMCNLMQESNQNKYGGSECN 361
              E  FLL++ER HF++R+ IKGIR++IFY+ PTYPHFYSE+CN+++ +N+    G E  
Sbjct: 659  QGEKQFLLFTERFHFYKRYTIKGIRNLIFYELPTYPHFYSEICNMLRATNR----GEEAT 714

Query: 362  MTVSVLYCRCXXXXXXXXXXXXXXXXXXXXXXPVHMYVTGD 484
             T +VLY +                        VH+++TG+
Sbjct: 715  WTCTVLYSKYDAQRLAAVVGVERAAQMLQSNKNVHLFITGE 755


>D25278-1|BAA04968.2|  632|Homo sapiens KIAA0036 protein.
          Length = 632

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 SSSVPRDVHVHGPVRAQHACAPRGAEQRAQPHEVAAAVQ 377
           S  V R++H     R QH    R  E+RAQ H  A   Q
Sbjct: 509 SDVVSRELHAQAQERLQHYFMGRALEERAQQHREALIAQ 547


>BC005806-1|AAH05806.1|  465|Homo sapiens IQ motif containing B1
           protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 SSSVPRDVHVHGPVRAQHACAPRGAEQRAQPHEVAAAVQ 377
           S  V R++H     R QH    R  E+RAQ H  A   Q
Sbjct: 342 SDVVSRELHAQAQERLQHYFMGRALEERAQQHREALIAQ 380


>AY964668-1|AAY46030.1|  598|Homo sapiens p53 and DNA
           damage-regulated IQ motif protein long isoform protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 SSSVPRDVHVHGPVRAQHACAPRGAEQRAQPHEVAAAVQ 377
           S  V R++H     R QH    R  E+RAQ H  A   Q
Sbjct: 475 SDVVSRELHAQAQERLQHYFMGRALEERAQQHREALIAQ 513


>AY714228-1|AAW47233.1|  598|Homo sapiens nephrocystin 5 protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 SSSVPRDVHVHGPVRAQHACAPRGAEQRAQPHEVAAAVQ 377
           S  V R++H     R QH    R  E+RAQ H  A   Q
Sbjct: 475 SDVVSRELHAQAQERLQHYFMGRALEERAQQHREALIAQ 513


>AY964667-1|AAY46029.1|  465|Homo sapiens p53 and DNA
           damage-regulated IQ motif protein short isoform protein.
          Length = 465

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 SSSVPRDVHVHGPVRAQHACAPRGAEQRAQPHEVAAAVQ 377
           S  V R++H     R QH    R  E+RAQ H  A   Q
Sbjct: 342 SDVVSRELHAPAQERLQHYFMGRALEERAQQHREALIAQ 380


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,115,347
Number of Sequences: 237096
Number of extensions: 1285900
Number of successful extensions: 4279
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4277
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)