Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9h16
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   5.0  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   6.7  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   6.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.8  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   8.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.8  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 222 LARAPRFRQRPHRKVLRDP 166
           L R+PR R RP R V R+P
Sbjct: 3   LPRSPRSRTRPARGVRREP 21


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +2

Query: 209 GALARRSKKEYLTTVDQE-----HTCIH-NLARNQQPPVAGKQSGE 328
           G + RR    +L  VD         CI   +AR+  PPVAGK S E
Sbjct: 292 GEMKRRDLVSWLKVVDCGIRWTCECCIECKMARSPFPPVAGKTSTE 337


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 188 CGRCRKRGALARRSKKEYLTTVDQEHTCI 274
           C RC +RG LAR    +  + VD++  CI
Sbjct: 390 CYRCLERGHLAR----DCQSPVDRQQACI 414


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 179 TFLCGRCRKRGALARRSKKEYLTTVDQEHTCI 274
           TF+C RC+  G  A  +K   L  V     C+
Sbjct: 188 TFVCMRCKATGTKAHTAKYCPLKPVITPEDCL 219


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 179 TFLCGRCRKRGALARRSKKEYLTTVDQEHTCI 274
           TF+C RC+  G  A  +K   L  V     C+
Sbjct: 189 TFVCMRCKATGTKAHTAKYCPLKPVITPEDCL 220


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = +2

Query: 161 PSGSRSTFLCGRCRKRGALARRSKKEYLTTVDQEHTCIHNLARNQQPPVAGKQ 319
           PS S +       +   + +RR   E L + + +  CI     +QQ    GK+
Sbjct: 259 PSKSATNHSINSIQSNDSGSRRHSAEILVSSNNKENCIQQHPSSQQQHHNGKE 311


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 283 CSEPATPSC 309
           CSEP TP C
Sbjct: 110 CSEPVTPDC 118


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 250  RGQVLFLGSPSQSTSLPAASTQKGTAGS 167
            RG  +  G P  +T++    T  G AGS
Sbjct: 999  RGGPMAAGGPPSATAISYGLTMAGAAGS 1026


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,026
Number of Sequences: 2352
Number of extensions: 13105
Number of successful extensions: 61
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)