Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9h16
         (551 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein.            32   1.2  
BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein.            32   1.2  
U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein.                   31   2.0  
AK097050-1|BAC04934.1|  149|Homo sapiens protein ( Homo sapiens ...    30   4.7  
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f...    30   6.2  
BC006447-1|AAH06447.1|  681|Homo sapiens NFX1 protein protein.         30   6.2  
AL356472-7|CAH72747.3|  833|Homo sapiens nuclear transcription f...    30   6.2  
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f...    30   6.2  
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f...    30   6.2  
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f...    30   6.2  
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f...    30   6.2  
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f...    30   6.2  

>X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein.
          Length = 1871

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 330 GSPDCFPATGGCWFRARLCIQVCSWSTVVKYSFLDRLARAPRFRQRPHRKVLRDPEGDIK 151
           GS D  P  G C  R R C +         + F + L++  + R RP+   +  P   + 
Sbjct: 502 GSGD--PHCGWCVLRHRCCREGACLGASAPHGFAEELSKCVQVRVRPNNVSVTSPGVQLT 559

Query: 150 VTLRTLTDV 124
           VTL  + D+
Sbjct: 560 VTLHNVPDL 568


>BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein.
          Length = 1871

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 330 GSPDCFPATGGCWFRARLCIQVCSWSTVVKYSFLDRLARAPRFRQRPHRKVLRDPEGDIK 151
           GS D  P  G C  R R C +         + F + L++  + R RP+   +  P   + 
Sbjct: 502 GSGD--PHCGWCVLRHRCCREGACLGASAPHGFAEELSKCVQVRVRPNNVSVTSPGVQLT 559

Query: 150 VTLRTLTDV 124
           VTL  + D+
Sbjct: 560 VTLHNVPDL 568


>U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein.
          Length = 1104

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTCIHNLAR 289
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C  N  R
Sbjct: 648 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKCPLNCGR 701


>AK097050-1|BAC04934.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39731 fis, clone SMINT2015745. ).
          Length = 149

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 324 PDCFPATGGCWFRARLCIQVCSWSTV 247
           P+C P  G C     LC QVC+ S V
Sbjct: 21  PECLPGLGACVVCPALCAQVCASSLV 46


>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 1120

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>BC006447-1|AAH06447.1|  681|Homo sapiens NFX1 protein protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 548 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 595


>AL356472-7|CAH72747.3|  833|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 833

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 1120

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 1120

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
           factor, X-box binding 1 protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription
           factor NFX2 protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 128 SVRVRSVTFISPSGSRSTFLCG-RCRKRGALARRSKKEYLTTVDQEHTC 271
           S R + +   S     +TF+C  RC K+  L  R K   +  VD+EH C
Sbjct: 664 SFRTKELPCTSLKSEDATFMCDKRCNKK-RLCGRHKCNEICCVDKEHKC 711


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,325,112
Number of Sequences: 237096
Number of extensions: 1942550
Number of successful extensions: 2964
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2964
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)