Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9h06
(586 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051557-1|AAK92981.1| 815|Drosophila melanogaster GH20665p pro... 31 1.5
AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA ... 31 1.5
AY075574-1|AAL68379.1| 980|Drosophila melanogaster SD04405p pro... 30 2.7
AE014298-775|AAF46062.3| 980|Drosophila melanogaster CG3160-PA ... 30 2.7
AF331162-1|AAK13466.1| 350|Drosophila melanogaster Wunen 2 prot... 29 4.6
AF236058-1|AAF36412.1| 350|Drosophila melanogaster Tunen protein. 29 4.6
AE013599-859|AAF58941.3| 350|Drosophila melanogaster CG8805-PA ... 29 4.6
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ... 29 6.1
BT001589-1|AAN71344.1| 350|Drosophila melanogaster RE26896p pro... 29 6.1
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA... 29 6.1
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro... 28 8.1
>AY051557-1|AAK92981.1| 815|Drosophila melanogaster GH20665p
protein.
Length = 815
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 253 SVVLLASVCGLDRLRPSPWTPSWVLSGVSFCHLHGQTWLYAETLIKL 113
+V+ ++ C D+L +P+ P W ++G HLH ++E++IKL
Sbjct: 405 NVLAISQRCSYDKL-VTPYPPGWRMTGTLVAHLHE----HSESVIKL 446
>AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA
protein.
Length = 1342
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 253 SVVLLASVCGLDRLRPSPWTPSWVLSGVSFCHLHGQTWLYAETLIKL 113
+V+ ++ C D+L +P+ P W ++G HLH ++E++IKL
Sbjct: 932 NVLAISQRCSYDKL-VTPYPPGWRMTGTLVAHLHE----HSESVIKL 973
>AY075574-1|AAL68379.1| 980|Drosophila melanogaster SD04405p protein.
Length = 980
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 283 LPSPWLPEVPSVVLLASVCGLDRLR-PSPWTPSWVLSGVSFCHLHGQTWLYAETLI 119
LP P L PS+V+LAS+ L +LR P W+LS ++F L G LY + I
Sbjct: 898 LPDPSL--YPSIVVLASLSLLLQLRAPQKCQGYWMLS-IAFYILAGVVLLYCQAAI 950
>AE014298-775|AAF46062.3| 980|Drosophila melanogaster CG3160-PA
protein.
Length = 980
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 283 LPSPWLPEVPSVVLLASVCGLDRLR-PSPWTPSWVLSGVSFCHLHGQTWLYAETLI 119
LP P L PS+V+LAS+ L +LR P W+LS ++F L G LY + I
Sbjct: 898 LPDPSL--YPSIVVLASLSLLLQLRAPQKCQGYWMLS-IAFYILAGVVLLYCQAAI 950
>AF331162-1|AAK13466.1| 350|Drosophila melanogaster Wunen 2
protein.
Length = 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 226 GLDRLRPSPWTPSWVLSGVSFCHLHGQTWL 137
G D+ SP+ S + SG CHL TWL
Sbjct: 160 GQDKRLHSPFPKSTMCSGYHLCHLELPTWL 189
>AF236058-1|AAF36412.1| 350|Drosophila melanogaster Tunen protein.
Length = 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 226 GLDRLRPSPWTPSWVLSGVSFCHLHGQTWL 137
G D+ SP+ S + SG CHL TWL
Sbjct: 160 GQDKRLHSPFPKSTMCSGYHLCHLELPTWL 189
>AE013599-859|AAF58941.3| 350|Drosophila melanogaster CG8805-PA
protein.
Length = 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 226 GLDRLRPSPWTPSWVLSGVSFCHLHGQTWL 137
G D+ SP+ S + SG CHL TWL
Sbjct: 160 GQDKRLHSPFPKSTMCSGYHLCHLELPTWL 189
>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
protein.
Length = 2515
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 168 ETPESTQEGVQGDGRRRSSPQTEAKRXXXXXXXXXXXXNSKRSTYPG 308
E+P +++G QG+ R +++PQ A++ +SKRS+ G
Sbjct: 935 ESPRRSRDGQQGNQRSQNAPQGYAQKPQRQKSTLDGNISSKRSSGVG 981
>BT001589-1|AAN71344.1| 350|Drosophila melanogaster RE26896p
protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 226 GLDRLRPSPWTPSWVLSGVSFCHLHGQTWL 137
G D+ SP+ S + SG CHL TWL
Sbjct: 160 GQDKRVHSPFPKSTMCSGYHLCHLELPTWL 189
>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
protein.
Length = 2515
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 168 ETPESTQEGVQGDGRRRSSPQTEAKRXXXXXXXXXXXXNSKRSTYPG 308
E+P +++G QG+ R +++PQ A++ +SKRS+ G
Sbjct: 935 ESPRRSRDGQQGNQRSQNAPQGYAQKPQRQKSTLDGNISSKRSSGVG 981
>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
protein.
Length = 1193
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 551 FNKLKNIVIYVFTNADDIFERYHIKVC*QDSCLK 450
F +LK + + N D+ E YH KV +DSCL+
Sbjct: 278 FKQLKVMDDWTEVNDYDVEETYHEKVASRDSCLE 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,426,928
Number of Sequences: 53049
Number of extensions: 353083
Number of successful extensions: 684
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -