BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9g07
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p pro... 270 1e-72
AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB ... 270 1e-72
BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p pro... 31 1.3
AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-P... 31 1.3
AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p pro... 31 1.7
AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein. 31 1.7
AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB... 31 1.7
AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA... 31 1.7
AE014296-2312|AAN11813.1| 231|Drosophila melanogaster CG32132-P... 30 3.0
BT029714-1|ABL75771.1| 130|Drosophila melanogaster IP17537p pro... 29 5.3
BT029697-1|ABL75754.1| 124|Drosophila melanogaster IP17437p pro... 29 5.3
BT029675-1|ABL75732.1| 125|Drosophila melanogaster IP17337p pro... 29 5.3
BT029653-1|ABL75711.1| 125|Drosophila melanogaster IP17237p pro... 29 5.3
AY061372-1|AAL28920.1| 1283|Drosophila melanogaster LD29423p pro... 29 7.0
AL033125-4|CAA21827.1| 911|Drosophila melanogaster EG:EG0007.4 ... 29 7.0
AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ... 29 7.0
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 28 9.2
>AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p
protein.
Length = 205
Score = 270 bits (661), Expect = 1e-72
Identities = 118/203 (58%), Positives = 153/203 (75%)
Frame = +2
Query: 23 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 202
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 203 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALGRLRTYDGCPPPFDNXXXX 382
RKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRV 120
Query: 383 XXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT 562
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T
Sbjct: 121 VVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLT 180
Query: 563 KDAGEKVSKATTPFTTIIQSYGY 631
A E ++KA PF II+SYGY
Sbjct: 181 VKARENIAKAAEPFNKIIKSYGY 203
>AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB
protein.
Length = 205
Score = 270 bits (661), Expect = 1e-72
Identities = 118/203 (58%), Positives = 153/203 (75%)
Frame = +2
Query: 23 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 202
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 203 RKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALGRLRTYDGCPPPFDNXXXX 382
RKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRV 120
Query: 383 XXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT 562
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T
Sbjct: 121 VVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLT 180
Query: 563 KDAGEKVSKATTPFTTIIQSYGY 631
A E ++KA PF II+SYGY
Sbjct: 181 VKARENIAKAAEPFNKIIKSYGY 203
>BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p
protein.
Length = 122
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = -2
Query: 491 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 342
+ HHG + HG H +YG H + H + G HH
Sbjct: 66 HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 115
>AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-PA
protein.
Length = 102
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = -2
Query: 491 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 342
+ HHG + HG H +YG H + H + G HH
Sbjct: 46 HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 95
>AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p
protein.
Length = 970
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = -2
Query: 590 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYEQHHGISIQFHGTVCLHDSNYGQVSD 411
P P+HQHP S H+Q P PS Q + H S Q H + Q
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQ--QQQQLHQLKSPQQHQQQL---QQHQQQQQ 733
Query: 410 RRHVEQQALQHVDGYQREEGTHH 342
++H +QQ H +Q+++ HH
Sbjct: 734 QQHHQQQ--HHQQQHQQQQQQHH 754
>AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein.
Length = 836
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = -2
Query: 590 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYEQHHGISIQFHGTVCLHDSNYGQVSD 411
P P+HQHP S H+Q P PS Q + H S Q H + Q
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQ--QQQQLHQLKSPQQHQQQL---QQHQQQQQ 733
Query: 410 RRHVEQQALQHVDGYQREEGTHH 342
++H +QQ H +Q+++ HH
Sbjct: 734 QQHHQQQ--HHQQQHQQQQQQHH 754
>AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB,
isoform B protein.
Length = 836
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = -2
Query: 590 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYEQHHGISIQFHGTVCLHDSNYGQVSD 411
P P+HQHP S H+Q P PS Q + H S Q H + Q
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQ--QQQQLHQLKSPQQHQQQL---QQHQQQQQ 733
Query: 410 RRHVEQQALQHVDGYQREEGTHH 342
++H +QQ H +Q+++ HH
Sbjct: 734 QQHHQQQ--HHQQQHQQQQQQHH 754
>AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA,
isoform A protein.
Length = 970
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = -2
Query: 590 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYEQHHGISIQFHGTVCLHDSNYGQVSD 411
P P+HQHP S H+Q P PS Q + H S Q H + Q
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQ--QQQQLHQLKSPQQHQQQL---QQHQQQQQ 733
Query: 410 RRHVEQQALQHVDGYQREEGTHH 342
++H +QQ H +Q+++ HH
Sbjct: 734 QQHHQQQ--HHQQQHQQQQQQHH 754
>AE014296-2312|AAN11813.1| 231|Drosophila melanogaster CG32132-PA
protein.
Length = 231
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 440 HDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEH 318
H+ ++ R H EQ QH + + HH Y + Q+H
Sbjct: 173 HEQHHHHHHHREHHEQHQHQHGHQHHPQHQHHHQYSSQQQH 213
>BT029714-1|ABL75771.1| 130|Drosophila melanogaster IP17537p
protein.
Length = 130
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 425 GQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHS-CHAL 303
G V RR V Q HV YQ+ +G H + +EHS C L
Sbjct: 78 GNVELRRKVPQSRSHHV--YQQTKGLLHAHAPDKEHSGCRVL 117
>BT029697-1|ABL75754.1| 124|Drosophila melanogaster IP17437p
protein.
Length = 124
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 425 GQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHS-CHAL 303
G V RR V Q HV YQ+ +G H + +EHS C L
Sbjct: 72 GNVELRRKVPQSRSHHV--YQQTKGLLHAHAPDKEHSGCRVL 111
>BT029675-1|ABL75732.1| 125|Drosophila melanogaster IP17337p
protein.
Length = 125
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 425 GQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHS-CHAL 303
G V RR V Q HV YQ+ +G H + +EHS C L
Sbjct: 73 GNVELRRKVPQSRSHHV--YQQTKGLLHAHAPDKEHSGCRVL 112
>BT029653-1|ABL75711.1| 125|Drosophila melanogaster IP17237p
protein.
Length = 125
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 425 GQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHS-CHAL 303
G V RR V Q HV YQ+ +G H + +EHS C L
Sbjct: 73 GNVELRRKVPQSRSHHV--YQQTKGLLHAHAPDKEHSGCRVL 112
>AY061372-1|AAL28920.1| 1283|Drosophila melanogaster LD29423p
protein.
Length = 1283
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -2
Query: 473 ISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHSCH 309
+S + H + +N G + + +QQ+ Q+ + YQ +G HH + H H
Sbjct: 403 MSQRMHYYTPYNSNNGGGSVNYKQQQQQSQQYQEHYQAPQGQHHHHHHHHHHHHH 457
>AL033125-4|CAA21827.1| 911|Drosophila melanogaster EG:EG0007.4
protein.
Length = 911
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -2
Query: 473 ISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHSCH 309
+S + H + +N G + + +QQ+ Q+ + YQ +G HH + H H
Sbjct: 31 MSQRMHYYTPYNSNNGGGSVNYKQQQQQSQQYQEHYQAPQGQHHHHHHHHHHHHH 85
>AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB
protein.
Length = 1911
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -2
Query: 473 ISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHMYVASQEHSCH 309
+S + H + +N G + + +QQ+ Q+ + YQ +G HH + H H
Sbjct: 1031 MSQRMHYYTPYNSNNGGGSVNYKQQQQQSQQYQEHYQAPQGQHHHHHHHHHHHHH 1085
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell factor
HCF protein.
Length = 1500
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +3
Query: 429 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVRRCRRRQ 596
+TVM + M GN VM+ + L K+ N GSPR + +
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSAKKSFVFNAGGSPRTVTLATKSIN 978
Query: 597 HHSLPSSNPM 626
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,637,705
Number of Sequences: 53049
Number of extensions: 678026
Number of successful extensions: 1945
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1943
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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