Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9f22
(401 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 81 2e-17
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 27 0.19
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 25 1.4
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 4.2
CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative dodecenoy... 23 5.5
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 22 7.3
AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding pr... 22 9.6
AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative odorant-b... 22 9.6
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 22 9.6
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 80.6 bits (190), Expect = 2e-17
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +1
Query: 55 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQ 171
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ Q
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQ 39
Score = 30.7 bits (66), Expect = 0.021
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 172 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNR 309
IE IYK AH +IR P ++ ++ RW + A R++R
Sbjct: 236 IENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 281
Score = 27.5 bits (58), Expect = 0.19
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +2
Query: 155 NASLFRLKPSTRKPMKPSVRIHPXXXXXXXXXXXXXXAGTNAS*HWPRGKTESSKRRLPS 334
+AS+ ++ PS R P + S R T + WPR + S +RLP
Sbjct: 244 HASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPT-SWPRSRPTSKPKRLPR 302
Query: 335 SR 340
R
Sbjct: 303 RR 304
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 27.5 bits (58), Expect = 0.19
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 175 EAIYKKAHEAIRADPSHKKKE 237
+++Y+K + +R DP+HK E
Sbjct: 238 DSVYRKVRDTVRDDPAHKNLE 258
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 24.6 bits (51), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 175 EAIYKKAHEAIRADPSHK 228
E +Y+ +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.0 bits (47), Expect = 4.2
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 184 YKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASF--IKRLQAQA 357
+ K +RA +KK L++ + ++KR + + + K I++ +A + R + +
Sbjct: 385 FAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEV 444
Query: 358 EA 363
EA
Sbjct: 445 EA 446
>CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative
dodecenoylCoA deltaisomerase protein.
Length = 324
Score = 22.6 bits (46), Expect = 5.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 261 EALEQTQANIGREEKQNQAKEGF-LHQETAGSGGSLNAL 374
+ALE+ AN+ E Q +AKEG ++ G GGS + +
Sbjct: 268 QALEREAANVTVELLQ-EAKEGADKFRQGIGRGGSFSGI 305
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 22.2 bits (45), Expect = 7.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 145 YARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDS 252
Y + RL +++ K H+ R + ELKKD+
Sbjct: 146 YEKIRLNPRLQEENKGVHQGYRTTRDFLRLELKKDT 181
>AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding
protein AgamOBP46 protein.
Length = 202
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 181 IYKKAHEAIRADPSHKKKELKKDSVKQKR 267
+ +KA + A K KE +KD QK+
Sbjct: 118 VVRKAIKECTAKADKKDKEFQKDVADQKK 146
>AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative
odorant-binding protein OBPjj1 protein.
Length = 199
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 181 IYKKAHEAIRADPSHKKKELKKDSVKQKR 267
+ +KA + A K KE +KD QK+
Sbjct: 115 VVRKAIKECTAKADKKDKEFQKDVADQKK 143
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 21.8 bits (44), Expect = 9.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 139 DYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVK 258
DYY+ K+ + ++E P H+ ELK+ V+
Sbjct: 217 DYYSCKKRIAYDGPPPPTSNEPYLVVPIHRHPELKEQCVR 256
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,859
Number of Sequences: 2352
Number of extensions: 6438
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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