Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9f12
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 311 HWWHCHSG 288
           H+WH HSG
Sbjct: 175 HFWHSHSG 182


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 419 GIKCSCTRCCSIGK 460
           G KC C R CS  K
Sbjct: 187 GNKCCCLRTCSSAK 200


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 582 LSACVWKEYTTNTGRLYYHNIE 647
           LS C+ + Y     RLY+ N++
Sbjct: 312 LSGCLCELYMAFMDRLYFSNLD 333


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 311 HWWHCHSG 288
           H+WH H+G
Sbjct: 241 HFWHAHTG 248


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 311 HWWHCHSG 288
           H+WH H+G
Sbjct: 241 HFWHAHTG 248


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 295 WQCHQCLGYLQIWLHYHRPW 354
           W C   LG++++W    R +
Sbjct: 708 WSCDCDLGWVEVWERKRRQY 727


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/46 (26%), Positives = 15/46 (32%)
 Frame = +3

Query: 420 ELNAPAPDVAPSANQSSPWSEHKAPDGRTYYYNSVTKQSLWEKPDD 557
           E+  P P       Q    ++  AP  R       TK      PDD
Sbjct: 388 EIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRDPDD 433


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/47 (21%), Positives = 19/47 (40%)
 Frame = -2

Query: 666  PNWTPLSQYYDSKVCQYLWYILSIHKQIIVSQLTFLSRQVFPTSFVW 526
            P+WT     + S      W+  +  ++   ++ T  S    PT+  W
Sbjct: 1033 PDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNW 1079


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,145
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)