Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9f09
         (133 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   4.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    19   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 4/18 (22%), Positives = 11/18 (61%)
 Frame = -1

Query: 133 FFFCLVIFLIKQTLQICL 80
           F++  ++F +   L +C+
Sbjct: 241 FYYAFILFTVHLLLLVCI 258



 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/22 (18%), Positives = 12/22 (54%)
 Frame = -1

Query: 133 FFFCLVIFLIKQTLQICLTAYI 68
           F++  +IF +     +C+  ++
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFV 137


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 64  YLYKQLDRSVVFV 102
           Y+YK LD+  V V
Sbjct: 464 YIYKYLDKKNVVV 476


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,499
Number of Sequences: 336
Number of extensions: 277
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 24
effective length of database: 114,521
effective search space used:  2175899
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)