Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9f09
         (133 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    20   9.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    20   9.4  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 106 IKQTLQICLTAYIGTLNNH*IVFIYN*IT 20
           +KQ   IC   Y    N H +V +   +T
Sbjct: 408 VKQDRPICCQEYADCANRHSVVTLPQPVT 436


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 109 LIKQTLQICLTAYIGTLNNH*IVFIYN 29
           LIK T Q     ++GT NN     +Y+
Sbjct: 321 LIKHTRQRKWKEFLGTANNASFGIVYH 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,564
Number of Sequences: 2352
Number of extensions: 1055
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 23
effective length of database: 509,883
effective search space used: 10197660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)