Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9f07
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    40   1e-05
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    37   2e-04
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    36   4e-04
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.34 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
 Frame = +2

Query: 257 LSGDTVCPSSMFRCPEGKCIPSLWVCNYQKDCDKGEDEFQSCRI-----KCPVC--SKFV 415
           ++ + +CP     C +G CI     CN +KDC  G DE  +C I     + P C  +  V
Sbjct: 111 ITDEPLCPDGSLACGDGNCIERGLFCNGEKDCSDGSDE-NTCDIDNDPNRAPPCDPAVCV 169

Query: 416 LPD 424
           LPD
Sbjct: 170 LPD 172


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +2

Query: 266 DTVCPSSMFRCPEGKCIPSLWVCNYQKDCDKGEDEFQSCRI-----KCPVC--SKFVLPD 424
           + +CP     C  G+CI     CN + DC K E +  SC +     + P C  ++ VLPD
Sbjct: 113 EPICPDGKLSCGNGECIDKELFCNGKPDC-KDESDENSCTVETDPNRAPDCDPTQCVLPD 171


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 266 DTVCPSSMFRCPEGKCIPSLWVCNYQKDCDKGEDEFQSCRIK 391
           + +CP     C  G+CI     CN + DC K E +  SC ++
Sbjct: 106 EPICPDGKLSCGNGECIDKELFCNGKPDC-KDESDENSCTVE 146


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 193  QGGVLPPPAGC-GGGSTGRHETPI 261
            +G  +PPP+G  G GSTG    P+
Sbjct: 1107 KGTAVPPPSGSSGPGSTGSKSPPV 1130


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 45  CSARDTSPKLSHSNFRTSCAGRQYRN 122
           CS   +SP  SHS+  +  A   Y N
Sbjct: 196 CSEASSSPTPSHSSESSFSAASSYTN 221


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 237 HRSTRDTYQATQYARV 284
           HRSTRD    T+Y  V
Sbjct: 26  HRSTRDDKYTTRYDNV 41


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 165 IHINTTHTQEAID*YFYIVFQHTKFE 88
           I  +T H    ID  F+  F+ +KFE
Sbjct: 208 ISYSTLHFVNYIDDLFFFRFEKSKFE 233


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 296  CPEGKCIPSLWVCNYQKDCDKGEDEFQSC 382
            C  G+ +P    CN    C  GE   Q C
Sbjct: 1103 CEPGQYVPDPHNCNAYYRCVLGELRKQYC 1131


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 254 VSCRPVLPPPQPAGGGRTPP 195
           +S RP+LPP      G  PP
Sbjct: 183 LSARPLLPPSFGIFPGGAPP 202


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 299 PEGKCIPSLWVCNYQ 343
           PE K  PS+ V  YQ
Sbjct: 97  PENKTFPSIQVMGYQ 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,324
Number of Sequences: 336
Number of extensions: 4071
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)