Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9f03
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   3.1  
AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-l...    24   4.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.2  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 641 IGAQQIHGYAQHPGNDPAAXWKYLET 718
           +G  +++G A     DP A W+Y E+
Sbjct: 654 VGGGRLNGPADRYYTDPCATWRYEES 679


>AF457555-1|AAL68785.1|  161|Anopheles gambiae salivary gland 1-like
           4 protein protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 582 AEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLXGN 707
           A  D + L  L   E +K        +AML+ LEM Q + GN
Sbjct: 78  ARQDQRTLYQLLQPEIMKRPAQNQSTLAMLTALEMGQVVEGN 119


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 612  NCLDFLNQIRPIRRFFGSFHRCLQFR 535
            NC++F  + +PIRR+    HR +Q++
Sbjct: 1144 NCIEFALKAKPIRRYIPK-HR-IQYK 1167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,054
Number of Sequences: 2352
Number of extensions: 10659
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)