Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc9e13
(544 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 63 2e-10
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 61 5e-10
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 1e-09
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 55 4e-08
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 1e-07
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 50 1e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 50 1e-06
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 50 2e-06
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 5e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 48 7e-06
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 45 3e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 1e-04
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 44 1e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 1e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 42 3e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 42 3e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 42 4e-04
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.003
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.005
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.007
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.012
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.049
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 35 0.049
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.049
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.35
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 32 0.35
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 0.61
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.74
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 0.80
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 1.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 1.9
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 2.5
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 2.5
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 29 2.5
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 2.5
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 29 3.2
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 4.3
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 28 5.7
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 28 5.7
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 27 7.5
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 27 9.9
SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 27 9.9
SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13) 27 9.9
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 201 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 377
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 378 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 61.3 bits (142), Expect = 5e-10
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +3
Query: 279 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 443
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 444 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
W+ ++T + + +P D Q+CT KFGS
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 210
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Frame = +3
Query: 135 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 299
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 300 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 458
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 459 LDISTPISMQLDNWPNDMQTCTFKFGS 539
I + + + +P D+Q+C FGS
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGS 181
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 135 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 299
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 300 WNAGEW-GCSTWLVSSERLWRPDVVLLN 380
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +3
Query: 219 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 392
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 393 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 246 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 416
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 417 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V +NG V W+ + + + M + ++P D Q C KF S
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 425
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 426 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
S++GS +W+ I T + + +P D+Q C KFGS
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGS 123
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +3
Query: 210 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 386
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 387 ATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 52.4 bits (120), Expect = 2e-07
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Frame = +3
Query: 42 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 221
M+ + LLPFL S E+ +++ L Y++E+ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 222 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAT 392
E + + + + W++ L+W+ +G T + V+ +W+PD+VL +
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGE 108
Query: 393 TAGDYAL--RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
T Y RA + +NG W +I + ++ + +P D Q C KFGS
Sbjct: 109 TGAIYKFDTRATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGS 159
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 443
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 444 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
W+ + S+ ++++ +P D Q C+ KFGS
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Frame = +3
Query: 249 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 413
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 414 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+S +GS +W + + + +P D QTC KFGS
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Frame = +3
Query: 252 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 404
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 405 ----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
Y + + +NG SW+ + + +P D Q CT +FGS
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGS 124
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 431
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+G+ +W+ +T + + +P D Q C KFGS
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGS 139
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 270 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 428
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
N G W + + SM L WP D QTC KFGS
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGS 219
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 440
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 441 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V WI + ++ ++++ WP D Q CT F S
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSS 496
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 431
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+G+V W+ I + + + +P D Q C FGS
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGS 642
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YALRARVSN 431
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 432 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+GS W+ + + + +P D Q+C KFGS
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGS 170
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 270 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 434
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 435 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
G + W + T + + +P D QTC FGS
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGS 182
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 147 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 311
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 312 EW-GCSTWLVSSERLWRPDVVLLNAA 386
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSV 443
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 444 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
W + T ++ + ++P D Q C FGS
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGS 93
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 386
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 279 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 437
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 438 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V W+ ++ +++ WP D Q CT F S
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSS 95
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLNAAATTA----GDYALRARVSNNGS 440
W DKRL AG+ S L S W+PD NA + D R + +G
Sbjct: 273 WTDKRL---AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGK 329
Query: 441 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+ + + + I M L ++P D Q C KFGS
Sbjct: 330 IFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGS 362
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 345 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 524
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 525 FKFGS 539
F S
Sbjct: 86 ISFES 90
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 41.1 bits (92), Expect = 6e-04
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Frame = +3
Query: 165 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 332
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 333 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 485
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 486 QLDNWPNDMQTCTFKFGS 539
+ N+P D Q+C S
Sbjct: 187 EFRNFPMDRQSCPVTISS 204
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 440
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 441 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V + + I+ M+L ++P D Q C K GS
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGS 101
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 434
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 435 GSVSWIKRLDISTPISMQLDNWPNDMQ 515
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 246 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 380
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 111 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 275
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 276 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 380
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 36.7 bits (81), Expect = 0.012
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = +3
Query: 135 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 302
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 303 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 482
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 483 MQLDNWPNDMQTCT 524
M L N+P D+Q C+
Sbjct: 195 MDLFNFPLDVQRCS 208
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 405 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 57
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 518
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 519 CTFKFGS 539
C FGS
Sbjct: 77 CNLVFGS 83
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 518
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 519 CTFKFGS 539
C FGS
Sbjct: 204 CNLVFGS 210
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.35
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 186 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 362
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 363 DVVLLN 380
D+VL N
Sbjct: 127 DIVLYN 132
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 414 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+A V +NG W +I + + + +P D Q C KFGS
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGS 62
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 31.5 bits (68), Expect = 0.46
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Frame = +3
Query: 111 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 278
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 279 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 443
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 444 SWIKRLDISTPISMQLDNWPNDMQTC 521
R+ ++ M L +P D QTC
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTC 184
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 0.61
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 135 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 308
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 309 GEWG-CSTWLVSSERLWRPDVVL 374
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.74
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 380
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 21.0 bits (42), Expect(2) = 0.74
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 498 WPNDMQTCTFKFGS 539
+P D Q C KFGS
Sbjct: 1509 FPFDEQKCLLKFGS 1522
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 378 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
N A T + + ++ N+G W I + ++ + +P D Q C KFGS
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGS 58
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 420 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 530
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 279 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 380
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 345 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 515
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 516 TC 521
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 327 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 437
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 159 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 323
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 324 STWLVSSERLWRPDVVLLNAAA 389
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 521
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 159 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 323
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 324 STWLVSSERLWRPDVVLLNAAA 389
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 380
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 236 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 132
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+ + G + W + T + + +P D QTC FGS
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGS 57
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 114 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 281
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 282 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 380
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+ ++G+ SW +I + + + +P D Q+C FGS
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGS 48
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+NG+ W + + +++ +P D QTC KFGS
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGS 243
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 464 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-FPCVPTQS 291
VQ + DG + Y S VP G S + V+P QA G +P A P P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 290 FVDP 279
+ P
Sbjct: 1232 AIRP 1235
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 287 VDPIHLKICQYPHGGLGLTNVSMSQMQGQVDYDFGVGGRLPIV 159
+D I LK+ + GL+ + +QG V YDFG+ LP+V
Sbjct: 368 LDEIALKLPEPVRVTPGLSYCVKAHIQGPVKYDFGITA-LPVV 409
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 333 AKCCSPIPLRSNSVVCRSNSFEDL 262
++C +P+R VCR N F DL
Sbjct: 1223 SECLEELPIREAVKVCRHNCFNDL 1246
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 429 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
N G++ W + + + + +P D Q C+ FGS
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGS 48
>SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 423 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 539
+S++G+ +W + + S+ + +P D Q CT FGS
Sbjct: 28 LSSDGTNTWYAPSILRSRCSIDITFFPFDDQRCTLHFGS 66
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/95 (23%), Positives = 36/95 (37%)
Frame = +3
Query: 165 RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS 344
R P+ K+ H R +N E E +++ L ++ + + WL S+
Sbjct: 193 RSWEPERKVTNTEIEHCRPSNANEEELQLQLALALSKQEAEEHKELDKEKMRDYAWLSST 252
Query: 345 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSW 449
+ P AA A + A VS+ GS W
Sbjct: 253 PPVADPWGAPQAAAPVAADPWGAPAPVSSAGSNPW 287
>SB_33848| Best HMM Match : RasGEF_N (HMM E-Value=2.3e-13)
Length = 899
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 319 PHSPAFQLSRLSIQF--I*RSASIRTVDSDSRMLAC 218
PHS A QLS L++ F R ++R+VD L C
Sbjct: 113 PHSRAMQLSGLAVAFSRYDRKRNLRSVDEGDGELLC 148
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,891,913
Number of Sequences: 59808
Number of extensions: 391020
Number of successful extensions: 1187
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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