Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9e01
         (121 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in P6....    36   0.24 
UniRef50_UPI0000DB78BB Cluster: PREDICTED: similar to Galactosid...    30   8.8  

>UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in
           P6.9-VP48 intergenic region; n=13;
           Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa
           protein in P6.9-VP48 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 361

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +2

Query: 62  MSAIALYLEINKLRLKI 112
           MSAIALYLEINKLRLKI
Sbjct: 1   MSAIALYLEINKLRLKI 17


>UniRef50_UPI0000DB78BB Cluster: PREDICTED: similar to Galactoside
           2-alpha-L-fucosyltransferase 2
           (GDP-L-fucose:beta-D-galactoside
           2-alpha-L-fucosyltransferase 2) (Alpha(1,2)FT 2)
           (Fucosyltransferase 2) (Secretor blood group
           alpha-2-fucosyltransferase) (Secretor factor) (Se)
           (SE2)...; n=2; Apocrita|Rep: PREDICTED: similar to
           Galactoside 2-alpha-L-fucosyltransferase 2
           (GDP-L-fucose:beta-D-galactoside
           2-alpha-L-fucosyltransferase 2) (Alpha(1,2)FT 2)
           (Fucosyltransferase 2) (Secretor blood group
           alpha-2-fucosyltransferase) (Secretor factor) (Se)
           (SE2)... - Apis mellifera
          Length = 339

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 93  FISKYNAIALIVTDDAHLLCNYHLD 19
           FI KY+ +  +VT D  + C YHL+
Sbjct: 242 FIGKYDNVVFVVTSDNIVWCKYHLN 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,841,798
Number of Sequences: 1657284
Number of extensions: 756100
Number of successful extensions: 2166
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 575,637,011
effective HSP length: 20
effective length of database: 542,491,331
effective search space used: 10307335289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)