Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc9e01
         (121 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   6.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   6.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    18   8.1  

>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = -2

Query: 117 FFIFNRNLFISKYNAIALIVTDDAHLLCNY 28
           F+  NR+     +NAI   +        NY
Sbjct: 299 FYAINRSTIFRMFNAIVTFLIVMVQFETNY 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = -2

Query: 117 FFIFNRNLFISKYNAIALIVTDDAHLLCNY 28
           F+  NR+     +NAI   +        NY
Sbjct: 619 FYAINRSTIFRMFNAIVTFLIVMVQFETNY 648


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 55  GHDERYRVVFGN 90
           GH   +R+VF N
Sbjct: 507 GHPNFFRIVFQN 518


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,992
Number of Sequences: 336
Number of extensions: 265
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 20
effective length of database: 115,865
effective search space used:  2201435
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)